| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1562 |
|---|
| Symbol | |
|---|
| ID | 5409432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 1501748 |
|---|
| End bp | 1502311 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640871232 |
|---|
| Product | transformation system protein |
|---|
| Protein accession | YP_001407092 |
|---|
| Protein GI | 154148547 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.586126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GTTTTACAAT GATCGAGTTG ATCTTCGTTA TCGTTATTTT AGGTATCTTG
GCAGCTATCG CCATTCCAAG ACTAGCAGCT ACCAGAGATG ATGCAGAGCT TTCAAAGGCA
GCTACAAATT TAAGTACTGC AGTAAGTGAT TTGACTGCTT ACTATACATC AAAAACAGAT
TTCGGGGATG CAATACCTGA TATGACAAAT GTATCTTTAA AGACAGAGGG TGTAACAGTA
ACAATAACAG ATTATACACC TAAAGCTTCA GCTAGTTTGC AATTGAAAAA CAAGAATTGT
ATAAATATCG CAGCAGTTGC TTCAGTAGCC GATACTGTTG ATGCTACTAC TAATAAAGTA
ACTAAAAAGG GAACTCCTGC GTTTGTATTT GTATCTAAAG CATCAGGTGC AGATCCACTA
TGTGATCAAT TGGCAGCTAT GCCTTCAGTT AAAAAAATGC TTGAGGCTGA GCCTGTATAC
GGTAAAGATG ATGCTGGCAA AGCTCTTAAA CTACCAAAAG GTTCATATCC TGTTGGCGGA
AGCAATGTAG TTTATTCAGA TTAA
|
|---|
| Protein sequence | MKKGFTMIEL IFVIVILGIL AAIAIPRLAA TRDDAELSKA ATNLSTAVSD LTAYYTSKTD
FGDAIPDMTN VSLKTEGVTV TITDYTPKAS ASLQLKNKNC INIAAVASVA DTVDATTNKV
TKKGTPAFVF VSKASGADPL CDQLAAMPSV KKMLEAEPVY GKDDAGKALK LPKGSYPVGG
SNVVYSD
|
|---|
| |