| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1561 |
|---|
| Symbol | |
|---|
| ID | 5409719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 1500344 |
|---|
| End bp | 1501600 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640871231 |
|---|
| Product | site-specific recombinase phage integrase family protein |
|---|
| Protein accession | YP_001407091 |
|---|
| Protein GI | 154149279 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.885578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG TCTGTAAGGC GAATAAAATT TATATGCGAT TTACATCAAA TTCGAAAACG
ATAGAAAAAT CGCTTAAAAT GGATGTTTGT GAGAAAAATT TAAAATTTGT GAATGACGTT
TTGCTGCCGA TTTTTGAAAA AATTCGTTGC GAAAGAAAAA TCAAGACAAA AAAGATTTTG
TATAGCGGCG CCAAAAACAT TAAAAAATTT GACATAAAAA CGCATAAAAT TATCAGAAAT
CCGCATACTT TGGGAGATTT TTGCACTATT GTATTTGATA AAATCAGTCA AAATAGAAAA
ATTTCCACAA TAAAAACAGC CGAAAATGCA ATAAACAGAT TTTTTGATTT TATAAATGAT
AAAAAAATCG CCGATTATAA AATTTATGAA CTTCAGGAGA TTGTAACTCA AATGCAAAAA
AATCTTGCTG CAAGCTCGAT AAAAACGATA TTTTGTTATA TCAAACAAGC TTTTAACGAA
GCGCTTAAAA ATGATATAAT CACAAAAAAT CCTGTAAATT TTGTAATTTT TCCTAAAATC
GTGCGAGAAA AAAAAGAAAT TTTGACACTT GATGATGTTG TAAAAATTTT TGACAACGCG
GGCGGCGAGC TAAAAAATTT TGGAAATCGC ATTTTTTACG GGACCAGGAG TGGCGAAATT
TTGGGACTTT GCGCCGATGA CTTCGATTTT AAAAACCATA AAATAATCAT AAACAAAAAT
CAGACGAGAT TTGGACTTAC TACTCCAAAA AACGGTAAAA ACCGCATAAT TCCGTTGGCT
AAAAATTTAG CTTTGTTTCT GAAATTTGAC AAATCTTCCA TTTTTAAAAA ATATTGTGAT
GAAAAATTCC GTTCAAAACA CGATAATGCA AGTGTTTCAG GCGATAACAA AATAAATTTC
GATAACAAAA TTTTTGATTT TAAAAATAAC GATGATTTTT ATGTTTCCCA TTTTGACGGA
GATTTTTACT GTTTAACCGA AAAATACGAT TTCGACAAAA AGCCGCTTTT TACTAAAGAC
TATTTTGCTT TGAGATACGA ATTCGACGCG CTTTTGAAAC ATCTTGGGCT TAAAAAATAC
ACTTTTCATA CTTTCCGCCA TACTTTTGCC AGTCTGCTTA TAGAAAATGA TGTCAATCCG
ACTTTTGTAG CTGAAATTTT AGGACACAGC AATTTAAATA TGCTTGAAAA AGTTTATGCG
CACAGTATAG TTTCGGCAAA AAATTTACAG AAATTAAACA AAGCGCTTAA TTTTTGA
|
|---|
| Protein sequence | MKIVCKANKI YMRFTSNSKT IEKSLKMDVC EKNLKFVNDV LLPIFEKIRC ERKIKTKKIL
YSGAKNIKKF DIKTHKIIRN PHTLGDFCTI VFDKISQNRK ISTIKTAENA INRFFDFIND
KKIADYKIYE LQEIVTQMQK NLAASSIKTI FCYIKQAFNE ALKNDIITKN PVNFVIFPKI
VREKKEILTL DDVVKIFDNA GGELKNFGNR IFYGTRSGEI LGLCADDFDF KNHKIIINKN
QTRFGLTTPK NGKNRIIPLA KNLALFLKFD KSSIFKKYCD EKFRSKHDNA SVSGDNKINF
DNKIFDFKNN DDFYVSHFDG DFYCLTEKYD FDKKPLFTKD YFALRYEFDA LLKHLGLKKY
TFHTFRHTFA SLLIENDVNP TFVAEILGHS NLNMLEKVYA HSIVSAKNLQ KLNKALNF
|
|---|
| |