| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1556 |
|---|
| Symbol | |
|---|
| ID | 5408282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 1495224 |
|---|
| End bp | 1496717 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640871226 |
|---|
| Product | anaerobic C4-dicarboxylate transporter DcuA |
|---|
| Protein accession | YP_001407087 |
|---|
| Protein GI | 154148972 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.678975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTA TGCTTATTTT AGAAATTATA GTTCTTCTTG GAGCTATTTT CTTAGGTGTT
AAACTTGGTG GTATGGCTAT AGGCTATGCC GGTGGTCTTG GCGTTGTAAT TTTGACAATG
CTTGGCTTAA AAGCGGGTAG CATTCCGTGG GATGTTATTT TGATTATTGC TTCAGTTATC
TCTGCTATTG CTGCTATGCA AGTTGCGGGC GGACTTGATT ATTTGGTTCA ATTGGCGGAA
AAACTTTTAA GGAAAAATCC TAAATATGTA AACTTTCTAG CTCCTACCGT TACTTATCTT
TTAACAATTT TTGCAGGTAC AGGTCACACT GCATTTTCTA TGATTCCGGT TATTGCAGAA
GTTGCAAAAG GTCAAAATAT AAAACCGTCT GTTCCGCTTT CAATTGCTGT TGTTTCATCT
CAAATAGCAA TCACAGCGAG CCCTGTTTCT GCGGCCGTTA TCTTTATGGC AGGCGATATG
GCTCTTGGCG GACTTGGAAT TTCTTATCCT ATTTTGCTTG CTATTTGGAT ACCTACAACA
TTTTTAGGTT GTATGATTAC AGCTTTGATT ATGAATTTGT TTTGGAATCT AAAACTTGAC
AGCGATCCTG TTTATAAAGA CAGACTTGCA AAAGGTTTGG TTGCTGAGCC GCAAAAAGAA
GGAAAATATA AAGAACTTCC AAAAGGTGCT AAAACTTCAG TTTTGATATT CTTCATCGGA
ATTATAGCGG TAGTATTTTA TGCAACAGCT ATAAGTAAAA ATGTGGCGCT TGTAAAACCA
AGCTATGTTA CAGGATATGA AAAAGTATAT CAAAGCAAAG ATGCAGCTAA ATTTGATGAA
ATAATAGCGG CAAATCCTAA CATAAAAATA TCTACAGATA AAGACACAGG CGTAAAATAT
GTAGAGGATA AAAGCAAACC TAAAAAATCT CTTACTCTAG CAAGAGATGG CGCTATTATG
AGCTTTATGC TAATTATCGG CGCATTGATA GTTATGATTT GTAAAATTGA TGTTGATAAA
ATCCCTGTTC AAAGTACATT TAAAAGCGGT ATGACTGCTT GTATATGTGT TCTTGGCGTT
GCGTGGCTTG GTGATACGTT CGTATCAAAT CACACGCAAG AGATTAAAGA TTTTGCAGGA
AATCTGGTTA AACAATATCC GGCGCTCCTA TCTGTTGCAC TTTTCTTTGC AAGTATGCTT
CTATATTCAC AAGCTGCAAC TGCAAAAGCT TTGATTCCGA CAGTTATAGT TGCTCTTGGG
CTAAGTGCTA CAAATAACGG TGATGCTTAT ATTCTGGTTG CTTCATTCGC TGCTGTTTCA
GCACTTTTCG TGCTTCCTAC CTATCCTACT TTGCTTGGTG CGGTTCAAAT GGATGATACA
GGAACTACAA GAATCGGAAA ATACGTATTC AACCACCCAT TCTTTATTCC TGGCGTTTTG
GCTATTGCGT TTTCCGTTAC ATTCGGATTT GTATTAGCTC CTATGATGCT ATAA
|
|---|
| Protein sequence | MDFMLILEII VLLGAIFLGV KLGGMAIGYA GGLGVVILTM LGLKAGSIPW DVILIIASVI
SAIAAMQVAG GLDYLVQLAE KLLRKNPKYV NFLAPTVTYL LTIFAGTGHT AFSMIPVIAE
VAKGQNIKPS VPLSIAVVSS QIAITASPVS AAVIFMAGDM ALGGLGISYP ILLAIWIPTT
FLGCMITALI MNLFWNLKLD SDPVYKDRLA KGLVAEPQKE GKYKELPKGA KTSVLIFFIG
IIAVVFYATA ISKNVALVKP SYVTGYEKVY QSKDAAKFDE IIAANPNIKI STDKDTGVKY
VEDKSKPKKS LTLARDGAIM SFMLIIGALI VMICKIDVDK IPVQSTFKSG MTACICVLGV
AWLGDTFVSN HTQEIKDFAG NLVKQYPALL SVALFFASML LYSQAATAKA LIPTVIVALG
LSATNNGDAY ILVASFAAVS ALFVLPTYPT LLGAVQMDDT GTTRIGKYVF NHPFFIPGVL
AIAFSVTFGF VLAPMML
|
|---|
| |