Gene CHAB381_1536 details

Gene Information

• Locus tag: CHAB381_1536
• ID: 5409500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: -
• Start bp: 1466305
• End bp: 1473654
• Gene Length: 7350 bp
• Protein Length: 2449 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 640871207
• Product: hemagglutination activity domain-containing protein
• Protein accession: YP_001407068
• Protein GI: 154148201
• TIGRFAM ID: [TIGR01901] filamentous haemagglutinin family N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.043951
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTA AATCTAAATT TTCAAAAAAA CTAATCGGTG TAAAACCGTC TTTGCCTATA 
AGTATGGCAA TTTCTTTTTC TTTAATCTTT ACACCGACTT TCAGTTTTGC AGAAATTCTA 
CCCGATAAAA ACTCACCAAT TGCAAGTCGT CCTACCATTT TAAAAACTCC AAATAATGCT 
ATACAAGTTG ATATCGTTAA ACCAAACAAT AAAGGAGTAT CAATAAACGA ATACTCTAAA 
TTTAATACAA CAGATGATGG AACGATACTT AATAATTCAA GAAATGGAGC AGATACTATA 
ACAGGAGGCT ATATACATGC AAATCCAAGA CTAAGCGAAG GCTCAGCCAA ACTTATTGTA 
AATAAGATAA ACTCAGATAA AAAAAGTAGC TTAAAAGGAA ATATAGAAAT AGCAGGTGAT 
AAAGCTGATC TTATGATAGC AAATCCTAGT GGTATAGATA TAGATGGAGT TCATTTTATA 
AACTCCAAAT CAACTACTTT AACTACAGGA GAGCTTAAAT TTAAAGATGG AGCTTTAAAT 
AAAATAGATG TAAATAAAGG TGAAATTTCT ATAAATAATA ACGGCTTAAA AGATGAAAGC 
GATTATTTAA ACATAATCTC TTATTCTACA AAGATAAATG CAAACATTCA TGCAAATGAG 
ATAAATATAA TAACCGGTAA AAATTCCATT TCCGAAGATA AAAAAATAAC AAAGCTAAAC 
GGTAGCGATA AAGATACAAA AACAAACAAC AAATCAAACG ATGAAGATAT TAAATTTTTA 
ATCGATTCGT CAAATCTTGG CGGAATGTAT GCAAATAAGA TAAAACTAAT AGGAACTAAA 
GAGGGTCTTG GAGTAAATAA TCAAGGTAAG ATAATTGCAA ATAGCTCCGT AAAAATAGAC 
ACAAACGGAA ATTTAATAAA TAACGGCGAG ATAATATCAA ATAACAATAT AAACATAAAA 
GCCGAAAACA TAAAAAATAT AGGAAACGAT AAAAGCAAAG CTTTATTAAA ATCACAATCT 
CTAAACATAA ACTCAAACAG CATAAACAAT AAAAACTCAA TCATTCAAAC GGATTCAAAG 
CTGAATATCA GGTCAAACAA TTTAATAAAT AAAAACTCCG TCATCGGAAA AGAAAGCTTA 
AATAATCAAG AAGATAAAAA AGATAACAAT AAAAATACAA ACTCTGACAC TAAAGAAAAC 
ACAACAAATA AAAACAAAGA TAAAAATAAC AACCGAAGTC AAATAATCAT TAAAGATACA 
ATCTTTAACG AAAACTCTAA AATACTTTCA AACGAATTGA ATTTAAATAT ATCCGAAGAT 
ATCTTTAATG AAAATTCAAA TCTGAATATT TTAAGTATAA ACGATAAATT AAACTCTATA 
AATAATAAAA ACTCAAATTT CATAATAGAT AAAGATGTAA ATCTTGATTT AAATGATTTT 
ACTCAAAAAT CTTCAAAATT TCATTCAAAC GGAAATTTAT TCATAAACTC GAATAAGGAT 
ATAAATAATA AAAGCAGTTC AAATATTTCA TCTTTAAAAA ATATAAGTTT AACTTCAAAT 
GAAAATATCT TCAATGAAAA TTCTCAAATC ATTTCAAACA ATAATATAAG CTTAAATGCA 
AACAAAGATA TAAATAATAT AAACTCCAGA ATTTCATCGA ATAAAAATAT AAGTCTGAAT 
GTAAAAGAAG ATATAAATAA TATAAACTCT ATTTTAAGCT CAAATAAAAT AAATACTTAT 
TCAAACAATA TGTTTTTAAC GACTTCGAAA TTTATAGCGG ATAGCAGTAT CGGCATAAGA 
GTTTTAAACG ATCTTAATTC GGATAAATCC GACATTGTTT CAAACAATGT CATAAATATA 
AACTCAAACA ATAATTTAAA TTTAAATCTA AGTTCGTTAT TATCAGGCGG CAATGCTTTT 
ATAAAAGCAA GTTGTCTTTA TACAAACAAA GAAATAGTTT CAAATAATAA TTTAAATATA 
GCCTCTAAAG AGATAAAAAA TCAAGGCGAT ATAAAAGCAA AAAATATTGC TATCAATTCT 
TCTTTAATTA ACAATGACAA AGATTCAAAC ATTATATCTT ACGATAGTCT TGATATAAAA 
GCGGATATGC TAAATAACAG AAATCTGATA TATGCCTCAA ACAGTGCTTT TATAAAAGCA 
GACGATATTA TAAATAAAGA TACTTCGGAT AAAGGAATTT TCTCAAAAGA TTTAAAAATA 
ACTTCCGTTA ATTTAAATAA CTCAAACGGA AATATTATTT CAAATAAATT GTTAGATATA 
AAGATTAAAG ATTCTTTAAA TAATACTTTA GGCTATATAG GTGCTTATTT AGATCTTAAT 
TTAAACTCAT CACTTCTTAA TAATAAAGAT GGATTTATCA TCTCAAATAA AAATCTATTT 
ATAAATACCG ATAAATACAG TAATCACGGA AATCTTCAAG CAGGAAATAA TTTATCTTTA 
ATCACAAAAG ATACTATAGA TTATAATGGT GGCTTTTATG CAAATAAAGA TATCTTTATA 
AAAACAACAG ATGATTTTAT AAATAATACA AAGCTTATAT CAAACAATAA CCTTATAATA 
AATGCAAACA ATATAACAAA TAAAGGCACT ATTCACTCAT TAAACGATAT GAGTTTAAAC 
TCATATTTAA ATTTAAATAA CTTTGGCGAA ATAGCATCAA ATAAAAATCT TTTTATAAAC 
TCTAATTATT TAATGAACAA TAAAGCAAAT ATCTATTCAA ACAAAGCTTT GATAATTAAT 
TCAAACGATA TTTTAAATAT AGATAAATCA ACTCTTTATA GTAAAGATGA TATGATTTTA 
AATACAAATA CTCTTATAAA TAAAGATAGC TCAAATATAA TATCGGATAA AAACCTAAAT 
ATCTTTTATG TAAAAGATAA AATTTCAGAT GACAATATTT TAATTTTAAA TGATGATAAC 
TATAAAAATT ATAAAAGCTC TAAAATAGAT AATCTCTCAT CTTTGATGTA TTCAGAAAGT 
GATATGAACA TAAATGCTAA AGAGCTTAAT AACAGATCAC TTGATGAACT TAAAGTGGTA 
AAAGAAAAAA TCAAAAAAAC AATATATTTA GGATGTGATG GTTGGGGCGG ATTTGAATGC 
AGCAATGCGG TTTTAAATTT AAGTGTCGAT AAAAATACAG TATTAAAAAT AAAAAATGAA 
ATTTTAGATA AATATAATAA TCAGATAGAT GATAAAACAT TAAATAACGA ACTTATTAAA 
AAATTAACAC CTTTAGATGA AACTTTATAT GTATTAACCG AATTTAATAA TGAAAATTTA 
CCAGGAGAAT CGGAAAAATT TATAAAAAAT ATCTATATAG ATACAAAAAA TAATCAAATA 
ACAGTTTCAA GAGGTAAACC GCATAAAAAA GAAGAGGGAA GGGAAATAAG ATACACTTTC 
ACTAAAGAGC ATATAGATAA AGACAGCTTG GCCAAATTCA GACCTTCAAA CATAATTTCA 
AAAGGCAATA TAAATTTCTT AACAAATAAT TTATTAAATG ATAAAAGCAT AGTATTTGCA 
AACAAGGATA TAAATTTAAA AGATACGAAT TTAATTAATC AAGGACTTGA TCTTAATTAT 
GAGATGAATG CTAAAGGCGA ATACAGATGG AAACATAAAA GCCACAGCGG TAAAGGCGGT 
TATACTTCAA CCAAACAAAA AAACTATTCG CTTACAGGAT ATTCATCTAT ATTTGCAGCA 
AACGGTAAAA TAACCGGAAC TTTAACAAAT CTTGATAACA AAAAACCAAA TAGCACAGAT 
ATAATAATAA ATAAAACACC TGATTTTATG AAAGACGATA AGGATATATC ATATAAATCA 
CTGCTTGGAT ACAATCAAAC ATTAATCTCA CATCAAAACA TCGACTCAAA CAATATCGAA 
AATAAAGATT TTAAAAACCC ATACGAATCA AAAGATTTAA ATAAACAGGA TTTAACCCGA 
ACCGTATCAT TAAGTAAAGA TAATGTTTTT ATTATTAACG CTAAAAATCC GATCTTTAAA 
GATAATAAAA TAAATCCTAC TGATAAAAGA CATTACTACT TAAATACTAG CTACATATTT 
GATGAAAACA TTCCGAACAG TGATTATATG CATAATAAAC TGACTTCTAT TTATAACTTT 
AGAAACAGCG CTTTAAAAAG CATATTATTT AAAGACGGTA AGCCGATAGA TGCTTCATCT 
TTAATATATG CAGGAGATGG AATTTCTCTA GATATAGATG GAAATTTAAA TAACTACTCA 
GGCATTATAA GCAATAACTA CATAAAGATA AATGCAAACA ACATTACAAA TAAATTTGCA 
GATATAAAGG CAAATAATGA GTTAATTCTA AATGCAAATA ATGATATCTT AAATCTCTCT 
TCATATATCA AGGCAGGAAG CGTATATCTA AATGCAAATA ATATTGTAAA TCAAACCTTA 
TCAAATACAA ACACCCTAAC TCACTCTTAT GGGAAAGAAA GCTTTACAAA TATAGCAGAT 
ATTTCAACTA TTACTTCAAC CAAAGGTGAT ACAGTATTAA ATGCAAAAGA TAGTATCTAT 
CTAATAGGCT CAAACATAAA CTCAAATAAA AATATAGCCC TGTTTGCAAA TAACAACATC 
TTAAGTGAAA CTGTAAAAGA TAAAGGCTCA TATGATTTTT CTATGAGCGG GGGATATTAT 
AAAAGAGAGT ATGAGTATAA CATAGGATCA AACTTAAATG CAAAAGAAAA TATTTTATTA 
AAGGCAAATA AAGATATAAC TTTAATAAGT TCAAATTTAA ACTCAAATAA AGATATAGAA 
ATAAATGCAG GAGATAATAT AAATATTCTT TCATCAACAA ACAGTGATTA CAATGAAATA 
AAATCAACTT CAAAAGGATT TATGTCTAAA AAAACGGAAC TTATAAAATC ATTACAACAA 
GAGGTAAAAA GCTCGAATAT AGATGGGGAA AATATTTATA TCAATGCAAA CAATGGCATA 
AATTTACAAA GCGTAAATTT AATTGCAAAT CAAAGTTCAA ATAAAAAAGA TTTAAACGAT 
AATATAAATA ATTCAAAAAA CGGTAATAAA GGCACTATAT CTATCGTTTC AAATAACGGC 
AATATAAATA TAGCTTCAGC TTCTTATACT AATTACTACG ACAAACAAAC TGATAAATCA 
AGCTTTGGAG GTCTTAGTAA AAGTTCATCT AAAATAAACG ATACAACTAT CTCTCAAAGC 
TCATCAAATC TATTCAGTGC AAATAGTATA AATTTAAAAG CAAACAATAT AAATGTAATA 
GCTTCAAATT TAAAATCAAC AAACATTGAT ATTCAAGCAA AATTATTAAA TTTAATCTCA 
TCCAAAGAAA CAAATTCTCA TACCGAATTT AAAACCAGAT CAGGAATCAT TACGGCTACA 
ATTGAAGATA AAGGAAGTAT AAAAGAAATA GAAATTCCTT CAATCATTCA AGTAGATAAT 
AAGTTTATAT TAAACGGTAA AGATATAACA AATAAACTTG ACACTAAAAC ATATACTGAA 
ATTTCAAATT CTTTAAACTC ATTTGAGCTT AAAGAAAATG TATTAAAAGA ATTAAGTTCA 
AACAAAACTT TAAATATAAA AGAGATAAAT CAAATAAAAG CTACTCTAAA CTCAAAAGAG 
TGGAATGATA AAACAACAAC TCTAAGCGGA ATAGGAACAC TTATAGCTAC AGCAGTAACT 
ACTTATCTTA CAGCAGGAGC TGGAAGTGCA TTTGCAGCAA GTCTTGGAAC TACAGGAGCA 
AGTGCAGCTA CAACAGCAGC CGTAACAAAT GCCGTTATAG CAAATACTTC TATCCAAGCT 
AGTAATATGA TATTATCAAA CGGTAAAGTT AAATTTGATA TCGACTCTTT AACCAAATCA 
GCCTTAAGTG CAGGAATTGG TAGTATGGCA AGCTCATATA TAAATAGTTC TACTTACTTA 
ACAAATTCAA ATTTAATAAA CTCAAATTAT TTAGATATAT CATATGCCGA TATAGCAAAT 
ACTTTATCAA GCTCAGCCAT ACAAAGTGGA ATTTATGGAA CAAATTTTAA AGATAGCCTA 
CTATCAAATA TAAGTTCTAG CACAGGAAAC TATCTATTTA AAAAAGCAGG AGATATAGGA 
CTTATAACAA ACAGTAAAGA TGGAAGTTTA ACTAAAACTG CACTTCATTC ATTAGTAGGT 
GGAAGCATAA ATGCTATTCA AGGAGAAAGC TTTTTAGATG GAGCTATTAT TTCAGGTATA 
AATGAATTAT TAACTCCATT AAGTAGTAAT CTTAATAAAG ATGAACAAAT TCTAACTTCA 
CAACTGACAG GAATTCTAAC AGGAGCTTTA ATAAACTCTG AAGCTGGAGC AAAGCAAGGA 
TATAATCTTA CAACAAGTGC CGAAATGTAT AATAGGCAAT TGCATAAAGG AGATATGAAA 
AAAATAAAAG AATTATCAAA ACTTTATGCT AAAAAGAAAA ACATATCTTT AGATGAGGCT 
ACAAATGTAA TAGCTAAAGG ATATTATGCT TTAGTAGATA ATGATGCAAA TGAGTTTTAT 
ATTAAAAATT TAGATGAAGA TAAAGCTGTT GAAGTATTGA ATTCTCAAGA TTTTATAAAA 
AACAATTTAG ACTATTCTAA AACTGCATTT ATAGACAATA ATGAATTAAC AGGAGTTGGC 
TTTGCTACAA AAGAACAATA CTATAACAGA TACTCAAATT TAAAAGGCTA TGCAGAAAAT 
AAAGACTTTT ATAATAAATA TCTTGGAATT GATGGCATAA CAAACAATAC CAAGATATCT 
GGTTTAAATC TGGCGCAAGG AGTATATAAA CCATATAAGG ACTTAACCCA TCAAGTAATA 
ACCAATCCAT TAAATACTGC AAAAGATATG TTAATTGCAA TGCTAAATCC TATAAACTCC 
GGATATGAAT ACGGAAACAA TCTAAGACAA ACTTATGAAA AAGCAAATTT AGATAAGTTT 
TTAAATGATA CCACAAATAC AAACAGACAT TACGGAGAAC TTACAGGAAG TTTAGCTCCA 
GTAGTGATAC CAAGTGTCGG AGTTGGTATA AGTAAAGGTA TAAAAAGTGG AAGTAAGGTT 
TATAAAAATA TAGCAAATGA AACGGATAGC ATTAAAATTC AATTCGGAGG AAATAAAAAT 
GCGCAATATC ATGCTGAAAG GCATATAAAA CAAGATACAA CATTAGATAT AAATATGGTT 
AAAAAAGAAA TTAAAAATGA TTTTATTTCT AAAATTGATA AAAATCAAAA AAGCTATAAA 
ATTAAACTTG GCAAATATAA TTTGGAATAT AGAGTTTATA AATTGCAAGA TGGAACATAT 
AATATTGGAA GGATAACAGT TGAAAAATAA 

 

Protein sequence

MKFKSKFSKK LIGVKPSLPI SMAISFSLIF TPTFSFAEIL PDKNSPIASR PTILKTPNNA 
IQVDIVKPNN KGVSINEYSK FNTTDDGTIL NNSRNGADTI TGGYIHANPR LSEGSAKLIV 
NKINSDKKSS LKGNIEIAGD KADLMIANPS GIDIDGVHFI NSKSTTLTTG ELKFKDGALN 
KIDVNKGEIS INNNGLKDES DYLNIISYST KINANIHANE INIITGKNSI SEDKKITKLN 
GSDKDTKTNN KSNDEDIKFL IDSSNLGGMY ANKIKLIGTK EGLGVNNQGK IIANSSVKID 
TNGNLINNGE IISNNNINIK AENIKNIGND KSKALLKSQS LNINSNSINN KNSIIQTDSK 
LNIRSNNLIN KNSVIGKESL NNQEDKKDNN KNTNSDTKEN TTNKNKDKNN NRSQIIIKDT 
IFNENSKILS NELNLNISED IFNENSNLNI LSINDKLNSI NNKNSNFIID KDVNLDLNDF 
TQKSSKFHSN GNLFINSNKD INNKSSSNIS SLKNISLTSN ENIFNENSQI ISNNNISLNA 
NKDINNINSR ISSNKNISLN VKEDINNINS ILSSNKINTY SNNMFLTTSK FIADSSIGIR 
VLNDLNSDKS DIVSNNVINI NSNNNLNLNL SSLLSGGNAF IKASCLYTNK EIVSNNNLNI 
ASKEIKNQGD IKAKNIAINS SLINNDKDSN IISYDSLDIK ADMLNNRNLI YASNSAFIKA 
DDIINKDTSD KGIFSKDLKI TSVNLNNSNG NIISNKLLDI KIKDSLNNTL GYIGAYLDLN 
LNSSLLNNKD GFIISNKNLF INTDKYSNHG NLQAGNNLSL ITKDTIDYNG GFYANKDIFI 
KTTDDFINNT KLISNNNLII NANNITNKGT IHSLNDMSLN SYLNLNNFGE IASNKNLFIN 
SNYLMNNKAN IYSNKALIIN SNDILNIDKS TLYSKDDMIL NTNTLINKDS SNIISDKNLN 
IFYVKDKISD DNILILNDDN YKNYKSSKID NLSSLMYSES DMNINAKELN NRSLDELKVV 
KEKIKKTIYL GCDGWGGFEC SNAVLNLSVD KNTVLKIKNE ILDKYNNQID DKTLNNELIK 
KLTPLDETLY VLTEFNNENL PGESEKFIKN IYIDTKNNQI TVSRGKPHKK EEGREIRYTF 
TKEHIDKDSL AKFRPSNIIS KGNINFLTNN LLNDKSIVFA NKDINLKDTN LINQGLDLNY 
EMNAKGEYRW KHKSHSGKGG YTSTKQKNYS LTGYSSIFAA NGKITGTLTN LDNKKPNSTD 
IIINKTPDFM KDDKDISYKS LLGYNQTLIS HQNIDSNNIE NKDFKNPYES KDLNKQDLTR 
TVSLSKDNVF IINAKNPIFK DNKINPTDKR HYYLNTSYIF DENIPNSDYM HNKLTSIYNF 
RNSALKSILF KDGKPIDASS LIYAGDGISL DIDGNLNNYS GIISNNYIKI NANNITNKFA 
DIKANNELIL NANNDILNLS SYIKAGSVYL NANNIVNQTL SNTNTLTHSY GKESFTNIAD 
ISTITSTKGD TVLNAKDSIY LIGSNINSNK NIALFANNNI LSETVKDKGS YDFSMSGGYY 
KREYEYNIGS NLNAKENILL KANKDITLIS SNLNSNKDIE INAGDNINIL SSTNSDYNEI 
KSTSKGFMSK KTELIKSLQQ EVKSSNIDGE NIYINANNGI NLQSVNLIAN QSSNKKDLND 
NINNSKNGNK GTISIVSNNG NINIASASYT NYYDKQTDKS SFGGLSKSSS KINDTTISQS 
SSNLFSANSI NLKANNINVI ASNLKSTNID IQAKLLNLIS SKETNSHTEF KTRSGIITAT 
IEDKGSIKEI EIPSIIQVDN KFILNGKDIT NKLDTKTYTE ISNSLNSFEL KENVLKELSS 
NKTLNIKEIN QIKATLNSKE WNDKTTTLSG IGTLIATAVT TYLTAGAGSA FAASLGTTGA 
SAATTAAVTN AVIANTSIQA SNMILSNGKV KFDIDSLTKS ALSAGIGSMA SSYINSSTYL 
TNSNLINSNY LDISYADIAN TLSSSAIQSG IYGTNFKDSL LSNISSSTGN YLFKKAGDIG 
LITNSKDGSL TKTALHSLVG GSINAIQGES FLDGAIISGI NELLTPLSSN LNKDEQILTS 
QLTGILTGAL INSEAGAKQG YNLTTSAEMY NRQLHKGDMK KIKELSKLYA KKKNISLDEA 
TNVIAKGYYA LVDNDANEFY IKNLDEDKAV EVLNSQDFIK NNLDYSKTAF IDNNELTGVG 
FATKEQYYNR YSNLKGYAEN KDFYNKYLGI DGITNNTKIS GLNLAQGVYK PYKDLTHQVI 
TNPLNTAKDM LIAMLNPINS GYEYGNNLRQ TYEKANLDKF LNDTTNTNRH YGELTGSLAP 
VVIPSVGVGI SKGIKSGSKV YKNIANETDS IKIQFGGNKN AQYHAERHIK QDTTLDINMV 
KKEIKNDFIS KIDKNQKSYK IKLGKYNLEY RVYKLQDGTY NIGRITVEK