| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1475 |
|---|
| Symbol | |
|---|
| ID | 5408384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 1411663 |
|---|
| End bp | 1412808 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 640871147 |
|---|
| Product | putative AcbV |
|---|
| Protein accession | YP_001407011 |
|---|
| Protein GI | 154149205 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000178671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATAA AAGTTATAAC AGGAAGGTAT CCTAGTTTAA ATAATCCATA TAATCATATG
TTTGTTCATA CTAGAAATAT GGAATATTTA AATTATGGGC ACAGTGTGGA AGTTTTTGTT
CCTTCAAAAA ATAAATATAC CTATAATATT GATGGAATAA AAGTAAACTA TATGACATCA
AAAGAAATTA TAAAAAGTTT AGATGATAAA TGTTGTGTGA TAATTCATTT GCTAATTCAT
TCACTGATTG ATGAGATAGA TGGTGGTGTT ATATATCAAC ATATTATTAA AAACGATATA
AAAACATTGT TTTTTATACA TGGCATAGAG GTTCAAAAAA TTCTAAAGAG TAGAACAGAT
GATATTAAGT TTTCTCAACC AAAAAGTATT ATAAGGTTTT TATATAGAGA TTTCTATCTC
ATACATAAAA TGAAAAATAC CATTCAAGAT ATTTTAAAAA ATACTAAAAA TATAAAATTT
GTTTCGGTGT CAAAGTGGAT GCAAAAAGAA GCGGAAAATA CTCTTGGGGT AAAATTTGAA
AATAAAATTT TCATTATACC AAATGGCATA GATACTAATT TATTTTACTA TCAAGAAAAT
TTATATAATA ATAAATATAA AATTTTAACC ATTAGACCGT TAATTTTAAA AGGTAAATAT
GCAGTAGATC TATCTATTGA TACTATGAAA TATATTACAA ATTATAATGT TAGTTTAAAT
ATATATGGAA AAGGAAATGA ATATAATAAC ATCGTAAAAT ACATAAGGGA TTTAAATTTG
AGCAATAAAA TAAATTTACA TAATAGCTTT ATAGAACATA AAGATATCCC AAAAATACAT
AAACAACATG GGATATATTA TGCTGTTACA AAAATGGATG CTCAAGGTGT ATCAATGTGT
GAGGCCATGT CATCTGGGTT GCCAACTATA TCTTTTGATG TTTGTGCTAT ATCTGAATTT
ATTACTAATA ATATTAATGG TTTGTTGATA TCTCCATATG ATTTAAAAGA TGCGGCAAAT
AAGTTAGATG AACTTATTTC AAATAAAAAT TTATTTTTAA GGCTGTCTGA AAACGCAAGA
AAATCAATAG AAAAAATAGA TATTAAAATT ACTACAAAAA AAGAATTGGA GTTATTAAAT
GTATAA
|
|---|
| Protein sequence | MKIKVITGRY PSLNNPYNHM FVHTRNMEYL NYGHSVEVFV PSKNKYTYNI DGIKVNYMTS
KEIIKSLDDK CCVIIHLLIH SLIDEIDGGV IYQHIIKNDI KTLFFIHGIE VQKILKSRTD
DIKFSQPKSI IRFLYRDFYL IHKMKNTIQD ILKNTKNIKF VSVSKWMQKE AENTLGVKFE
NKIFIIPNGI DTNLFYYQEN LYNNKYKILT IRPLILKGKY AVDLSIDTMK YITNYNVSLN
IYGKGNEYNN IVKYIRDLNL SNKINLHNSF IEHKDIPKIH KQHGIYYAVT KMDAQGVSMC
EAMSSGLPTI SFDVCAISEF ITNNINGLLI SPYDLKDAAN KLDELISNKN LFLRLSENAR
KSIEKIDIKI TTKKELELLN V
|
|---|
| |