Gene CHAB381_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1374 
SymboltrmA 
ID5409518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp1308820 
End bp1309893 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content31% 
IMG OID640871051 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001406923 
Protein GI154147974 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTGCT CATATTATGG CAAATGCGCA GGTTGCAATT TAAATCTGCC TTATAATGAT 
GAAATTTCGT TTAAAACTGA TTTTTTAAAG AGCGAATTTA AAGAATTCTA TCAAGGTGAA 
ATTGAAATTT TTAAAAGTGA TGAGTGGAAT TTCAGAAATC ACGCGGAATT TGGTATTTGG 
CACGAAAAAG GCGATGTTTT CTATACAATG CGCGGAAATA GTAATGAGCG CGTAAAAATA 
GAAACCTGTC CCAAAATGGA TAAAAAAATC GTGGAAATGA TGCCGAAATT ATTACAAAAT 
TTGCGTGAGA ATAAAAATTT AAAAGAGCGT CTTTTTGGAA TCGAGTTTAT AGCTACGAAA 
TTCGATTTTA TGGCGATTTT GCTTTATCAT AAAGATATTT TTAATATCAA AGATGATTTG 
GCTAAATTAG CTGAAATTTT GGATATTAAA ATTTCAGCCA GAAGTCGCGG AAAATTTTTA 
AATTTCGGTG GCGAAATTTT AAGAGAAAAG GTGCAAAATT TCATCTATAG ATTTAACGCC 
GATGCATTTT TTCAATCAAA TACAAAAGTA AATGAAAAGA TGATTTTGTT TGTTTTAAAT 
GCCGTAAAAA ACGGTAAAGA TCTTCTTGAA ATGTATTGTG GACACGGAAA TTTCACTTTG 
CCGTTAGCTT CTGAATTCGG TAAAATTTTA GCAAATGAAA TCAGCAAAAA CTCTATAAAA 
AATGCGCGCG AAAATTCTAA AAACAAAGAT AATATAAATT TTGTAAGAAT GTCGGCAAAA 
GAGCTGATAG ACGCTTTTAA CGGCGTTAGA GAGTTTAACA GGTTAAAAGA TATCGATATT 
ACAGATTTTG ATTTTTCGCA TGTTCTGGTT GATCCGCCGC GCGCAGGAAT AGAACCGGAA 
GTTTTAGATT TTATACAAAA TTTTAAAAAT ATAATTTATA TTTCATGCAA TCCTGCAAGC 
TTAAAACAAA ATTTACAAAT TCTATGTGAA ACGCACAAAA TTACGAAATT TGCACTTTTT 
GATCAATTTG TGCATACCGA ACATATAGAA TGCGGAGTGG TTTTACAAAA ATGA
 
Protein sequence
MSCSYYGKCA GCNLNLPYND EISFKTDFLK SEFKEFYQGE IEIFKSDEWN FRNHAEFGIW 
HEKGDVFYTM RGNSNERVKI ETCPKMDKKI VEMMPKLLQN LRENKNLKER LFGIEFIATK 
FDFMAILLYH KDIFNIKDDL AKLAEILDIK ISARSRGKFL NFGGEILREK VQNFIYRFNA 
DAFFQSNTKV NEKMILFVLN AVKNGKDLLE MYCGHGNFTL PLASEFGKIL ANEISKNSIK 
NARENSKNKD NINFVRMSAK ELIDAFNGVR EFNRLKDIDI TDFDFSHVLV DPPRAGIEPE 
VLDFIQNFKN IIYISCNPAS LKQNLQILCE THKITKFALF DQFVHTEHIE CGVVLQK