Gene CHAB381_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1344 
Symbolrho 
ID5408802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1273200 
End bp1274495 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content36% 
IMG OID640871021 
Producttranscription termination factor Rho 
Protein accessionYP_001406893 
Protein GI154149028 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.88127e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAA AAAAACAACA TACAAGAACG CATATACCGG TAGATGGTTA TAAAATTGAA 
GAACTTCGTA TCCTTGATTT AGATGATTTA ATTACAATCG CAACAAGTGT CGGCATCGAA
AATCCGCGTG AATTTCGCCG CCAAGAATTA GTATTTGAAA TTTTAAGAGC GCAAACTAAA
CAAGGCGGTT TTATACTTTT TACAGGAATT TTGGAAATAT CACAGGAAGG TTACGGTTTT
TTAAGAGGAA TAGATTCGAA TTTCAGCGAT AGTATAAATG ATGCTTATGT AAGTCTATCT
CAAATAAGAA AATTTGCACT TCGCGTAGGA GATATAGTAA CAGGACAAGT ACGTGAACCA
AAGGATCAAG AAAAATATTA CGCGCTTTTA AAAATTGAAG CTATAAATTA CAAATCAATA
GCAGAATCAC GTGAACGACC ATTATTTGAT AATTTAACAC CTATTTTCCC AATCCAAAAA
TTAAAACTTG AGTACGAATC AACAAAATTA ACAGGTAGAG TTTTGGATCT TTTTACTCCT
ATCGGCAAAG GTCAAAGAGG TCTAATCGTG GCTCCTCCAA GAAGCGGAAA AACTGAAATA
ATGAAAGAAC TTGCTCACGG TATTGCACAA AATCATCCTG AAGTGCAACT TTTAGTACTT
TTAGTAGATG AGCGTCCGGA AGAAGTAACA GATATGGAAC GCTCCGTAAA AGGCGAAGTT
TTCAGCTCTA CTTTTGATCA ACCGGCATTT AATCATGTAA GAGTTGCGGA ATTGGTAATA
GAAAAGGCAA AACGTTCAGT TGAAATGGGT AAAGATGTAA TAATTTTACT AGATAGCATT
ACACGGCTTG CACGCGCCTA CAATGCTGTA ACTCCAAGCA GCGGAAAAGT TTTAAGCGGT
GGAGTTGATG CGAATGCTCT TCACAAACCG AAAAGATTTT TCGGAGCCGC CAGAAATATA
GAAAACGGTG GAAGTCTAAC GATAGTAGCT ACAGCGCTGA TAGATACCGG CTCTCGCATG
GATGATGTGA TTTTTGAAGA ATTTAAAGGC ACCGGAAATA GCGAAATAGT ACTTGATAGA
AGTATTTCGG ATCGTCGCAT TTATCCGGCT GTAAATATAT TAAAATCCGG AACCAGAAAA
GAAGAACTTT TGCAAAATCC TCTTGATTTG CAAAAAATTT GGGCTATAAG ATCGGTAATT
TCAACTATGG ACGATATAGA AGCTTTGAAA TTTTTATATT CAAAGATGTT AAAGACAAAA
GATAACAAAG AACTTTTAGC TGTAATCAAC GACTAA
 
Protein sequence
METKKQHTRT HIPVDGYKIE ELRILDLDDL ITIATSVGIE NPREFRRQEL VFEILRAQTK 
QGGFILFTGI LEISQEGYGF LRGIDSNFSD SINDAYVSLS QIRKFALRVG DIVTGQVREP
KDQEKYYALL KIEAINYKSI AESRERPLFD NLTPIFPIQK LKLEYESTKL TGRVLDLFTP
IGKGQRGLIV APPRSGKTEI MKELAHGIAQ NHPEVQLLVL LVDERPEEVT DMERSVKGEV
FSSTFDQPAF NHVRVAELVI EKAKRSVEMG KDVIILLDSI TRLARAYNAV TPSSGKVLSG
GVDANALHKP KRFFGAARNI ENGGSLTIVA TALIDTGSRM DDVIFEEFKG TGNSEIVLDR
SISDRRIYPA VNILKSGTRK EELLQNPLDL QKIWAIRSVI STMDDIEALK FLYSKMLKTK
DNKELLAVIN D