Gene CHAB381_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1334 
Symbol 
ID5408982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1266291 
End bp1267079 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content32% 
IMG OID640871011 
Producthydrolase with alpha/beta fold 
Protein accessionYP_001406883 
Protein GI154148267 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.706412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTTCT TTCCAAAATC GCTGGAGCAA AATTTTGCTT GGAATTTTAA TGATAAATTT 
GATGAATTTT TTATTTATGT CGGTGACGAA ATTTTTAATC AAAAAAGTGT TTCATTAAAT
TTAATCGCGT TTCGTGCTGA GAATCCGAAA GGAGCTGTGC TGTTTTTGCA TGGAAATGCC
GGAAATTTAG GCGATTTCGC GCATTTTCGC AATATATTTT TGAAACACGG ATTTGATTTT
TATGTTTATG ATTATAGAGG TTTTGGGAAA AGCGGCGGAC GAATTTATAA TTCTTATGAA
CTTTTTAACG ACGCCGGGAA AATTTTTGAG TTTATGAAAA ATGATTTTGT AAAGCGAAAT
TTAGATTCAA CTAGTCAAAC GGATATGACT TCAAAATATC AAAAAAACAA TTTTATTATC
ATAGGGTATT CTATAGGCAG CGGTATAGCA GCAAATATAG GCACACAAAT GAAAGTTCAT
ACTATACTTA TAGCGCCTTA TTTTTCGCTA CGTGAATTAG CGGTTCAAAA GCTTCCTTTT
GTGCCGTCTT TTTTAGTGCG ATATGATATA AAAACCAATG AATATTTGCA AAAAAATTGT
TGCGCAAAAT CATTTAAAAT AGACATAATA TATGCTGAAT TTGATACGCT GATTCCACCT
GTAAATGCTT TAAGACTTGC AAAAATTGCA CCGAATGCGC GAGTTTTCGA AGTGATGGCC
GGACATAATG ATATTTTGTA TAATCCTAAA ATGAATGAAA TTTTTGATGA AATTTTGACT
CAAAAATGA
 
Protein sequence
MIFFPKSLEQ NFAWNFNDKF DEFFIYVGDE IFNQKSVSLN LIAFRAENPK GAVLFLHGNA 
GNLGDFAHFR NIFLKHGFDF YVYDYRGFGK SGGRIYNSYE LFNDAGKIFE FMKNDFVKRN
LDSTSQTDMT SKYQKNNFII IGYSIGSGIA ANIGTQMKVH TILIAPYFSL RELAVQKLPF
VPSFLVRYDI KTNEYLQKNC CAKSFKIDII YAEFDTLIPP VNALRLAKIA PNARVFEVMA
GHNDILYNPK MNEIFDEILT QK