Gene CHAB381_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1277 
SymbolmnmC 
ID5409230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1213690 
End bp1215693 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content33% 
IMG OID640870956 
Product5-methylaminomethyl-2-thiouridine methyltransferase 
Protein accessionYP_001406828 
Protein GI154148694 
COG category[E] Amino acid transport and metabolism
[S] Function unknown 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0226023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TAAACGGTAT TTTATTTAAC GAAAATTTTA AAGATTTTTA CTCAAATTTC 
AAAAATCCTT TCGGCGAGAG CGAATTTGTG TTCGGCTCAG CTGTAAATGA AATTTTAAAA
ACTCAAAATC GTGTAATTGT AGCAGAACTT GGCTTCGGTC TTGGTCGAAA TTTTTTAAAT
ATAGCCGCTA AATTTAAAAA TAGCGATAAA ATTTTGCACT TTGTTTCTAT AGAAAAATTT
CCTTTACAAA AGGAAATTTT GGCTAAATTT TATGAGAATT TCAAGTTTGA AGGTGCAAAA
AAACTTTTAA AACTTTATCC TACACTTGAA AGCGGTTTTC ACCGTATAAA ATTCAGTAAA
AATATCACGC TTGATCTGCT TTTCGGAGAT GCCGAATGTG TATTGAAAGA GTGTGAGTTT
AAAGCTGATA TTTGGCTTAT GGATGGATTT TCGCCAAGTA AAAATCCTGA TATGTGGAGC
GATGAAATTA CTTCCCAAAT AGCCAGACTT TGCAGGATTA AAGCAAAAAT TGCAACATAC
AGCGCTTCAA AAAAAGTGCA AAAAAGTTTG GAAAATGCAG GTTTTTGTGT AGTTAAAACG
CCGGGATTTA ATGGTAAGCG CGAAATGATA AGAGCTTATT TCAATGGAAA TTCAGGCGAG
ATCAAAGATT ATTTTTTCGA AAGGCCAAGT TTTAAAAGCG GCAAAAATGT GCTGATAATA
GGAGCAGGAA TCGCAGGAAT CGTTACTGCA ATTAAATTTC AAAATCTTGG ATATAAAACT
GTAATTGCAG AAAAAGCGTG CAGTGTCGCT GCTAATGCAA GCGGAAATTT TTGTGGAGTT
TTGGAACCCC TTATTACTAA AAAAGGCGTG AAACTAGGCG AAATGCATAA ATATGCTTTC
AAAATGGCGG TCAAATTTTA CAAAAAGAAT GTACCGAAAA ATCTTGCAAA ATTTTGTGGT
GCAAAAGAGT TTGCTTATAA TGATGACATT TTAAAGCGTT TTGAAACTCA TGATAAAAGT
GAAATTTTCG ATTTTAATCG AAAAGATCTG CCTTACGCTT CTATTTTTAT AAAAAATGCC
GCGCTTTTAA GACCGCGAAA AATTTGCGAA TTTTTTAGTA AAAAACTTAA TATAAAATTT
GGTTATGAGT TTAGTGATTT TGTTGAATCA AATGGCGGTT ATATTGTAAA TTTTGTCGGT
AAAAAGCCTT TAAAATGCGA TATTTTGATA TTTGCGATGG GGAGCGAAAG TGAAGAACTT
TTTGGCGGCG GGAAAAATGT GCGTGCAAAT TTCGATGATG CGATGCAAAT AAGCTCCGTT
CGCGGTCAAA TTACACTTTT GCGCCCATTT TTAAAGACGC CCATTCCTCT TGGCGCACGC
GGATATATTT GTCCTAAGAT CGGCAAACGC CAGTTAATCG GGGCTACTTA TGACAGAAAA
GATTATGAAA ATCAAGCCAG AACTTTCGAT GATGAAAGAA ATTTGCAAAA CGTGGCTGAG
CTTTTAAATA AAAATTTTGT TAAAAATACA GATACCAGAA ATTTAAATGA TAAAAAATTT
AAATTTGAAA TTTTGGATAA AAATGTTGAT TTCAATGTTT CAAAACAGAA TTTAAATTTT
AAAATGCACA CGCAAAATAA AGAGCTTGCT TTTAAAAATC AAATTTTAAA TGTTAAAATT
TTGGGTTCTC GTGTCGGATT TCGAGGATAT AGCGGTGATA GATTTCCGTT AATCGGTGCT
TTGCCGGACT GCGAATATTT CAAAGAAAAA TATAAAATTT TACCGTGGCA AAAAAATCGT
GCTAAAAATT TGCCACCAAA ATATTTAAAA AATATCTATA TAAATACATC TCATGGCGCT
AGAGGTCTTT GCACGGCGAT TTTGGGAGCT GAAATTTTAG CCGATTTGGT CACAAATCGT
CCGTTTTGTT TACCAAAAAG TCTTATCAAT GAGCTGGCAC CAAGCCGTTT TTTGATAAGA
AAACTTAAAA AAGGACTGAA ATAA
 
Protein sequence
MKFINGILFN ENFKDFYSNF KNPFGESEFV FGSAVNEILK TQNRVIVAEL GFGLGRNFLN 
IAAKFKNSDK ILHFVSIEKF PLQKEILAKF YENFKFEGAK KLLKLYPTLE SGFHRIKFSK
NITLDLLFGD AECVLKECEF KADIWLMDGF SPSKNPDMWS DEITSQIARL CRIKAKIATY
SASKKVQKSL ENAGFCVVKT PGFNGKREMI RAYFNGNSGE IKDYFFERPS FKSGKNVLII
GAGIAGIVTA IKFQNLGYKT VIAEKACSVA ANASGNFCGV LEPLITKKGV KLGEMHKYAF
KMAVKFYKKN VPKNLAKFCG AKEFAYNDDI LKRFETHDKS EIFDFNRKDL PYASIFIKNA
ALLRPRKICE FFSKKLNIKF GYEFSDFVES NGGYIVNFVG KKPLKCDILI FAMGSESEEL
FGGGKNVRAN FDDAMQISSV RGQITLLRPF LKTPIPLGAR GYICPKIGKR QLIGATYDRK
DYENQARTFD DERNLQNVAE LLNKNFVKNT DTRNLNDKKF KFEILDKNVD FNVSKQNLNF
KMHTQNKELA FKNQILNVKI LGSRVGFRGY SGDRFPLIGA LPDCEYFKEK YKILPWQKNR
AKNLPPKYLK NIYINTSHGA RGLCTAILGA EILADLVTNR PFCLPKSLIN ELAPSRFLIR
KLKKGLK