Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1042 |
Symbol | rpiB |
ID | 5409067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 977659 |
End bp | 978105 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640870727 |
Product | ribose 5-phosphate isomerase B |
Protein accession | YP_001406600 |
Protein GI | 154149471 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATAG AAAAAATTTT TATAGCAAGC GATCACGCGG GATTTGATGC AAAGCAAATC GCCAAAAAAA CATTAAATCA AATGAATTTT GAAGTTATAG ATTTAGGCAC GAACGATTCG CAAAAAAGCG TTGATTATCC TGATTTTGCT TATGCTTTGA GTAAAGAAAT CGCAAAGGAT GAAAAAAATT ATGGAATTTT GATTTGCGGA ACCGGAATTG GAATCAGCAT AGCTGCAAAC AGAAATCCAA AAATTCGCTG CGCACTTTGT CACGATGCAC TTACTGCAAA ACTTGCAAGA GAACACAATG ACGCAAATAT TTTAGCTTTT GGCGGCAGAA TTTTAGGTAG CGCTGAAATA GAAAGCATTA TAAAAATATT TTTTAATACT GAGTTTTTAG GCGGCCGTCA CGCAAGAAGA ATAGCTAAAC TGGGAGAAAT AAAATGA
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Protein sequence | MQIEKIFIAS DHAGFDAKQI AKKTLNQMNF EVIDLGTNDS QKSVDYPDFA YALSKEIAKD EKNYGILICG TGIGISIAAN RNPKIRCALC HDALTAKLAR EHNDANILAF GGRILGSAEI ESIIKIFFNT EFLGGRHARR IAKLGEIK
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