Gene CHAB381_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0996 
SymbolispG 
ID5409291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp936476 
End bp937531 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content38% 
IMG OID640870683 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_001406557 
Protein GI154148016 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATA AAACCAAAAA AATTTTTGCA GGAAATGTCG CTATCGGCGG CGATGCACCT 
ATTTCCGTGC AATCTATGAC TTTTTCAAAA ACAAAAGATA TAAAAGCAAC TCTTGAACAA 
ATAAATCGCT TATATTTTGC AGGTTGCGAT ATCGTGCGTT GCGCCGTTTT AGATAATAAA 
GATGCGGAGG CTTTAGAGGA AATTAAAAAA GAAAGTCCGC TTCCGATTGT AGCCGATATT 
CATTTTAATT ATCGCCATGC GCTAAAAACG GCGAAATTTG TCGATGCCAT TCGTTTAAAT 
CCTGGAAATA TCGGTGGAAG TGAGCGAATA AAAGCCGTTG TCGGAGCTTG CAAAGAACGG 
AATTTACCGA TTAGAATCGG AGTAAACAGT GGCTCTTTGG AAGAAAAATT TGAAAAAAAA 
TACGGCAGAA CACCAAAAGG AATGGTGGAA TCGGCTTTGT ACAATATCGA TTTATTGGAA 
AAAGAAAATT TTACCGATAT CGTTGTTTCG CTAAAATCAA GTGATACGAT AAAAACAATC 
AAAGCTTACA AAGCGCTTCG CAAAAAATGC GAATATCCTT TTCATCTTGG TGTTACGGAA 
GCTGGAACCG AATTTCATGC GACAATAAAA AGTGCCATTG CGCTTGGAAA TTTGCTGATT 
GCAGGAATCG GTGATACGAT AAGAGTAAGT ATTACGGGCG AACTTGAAAA AGAGATAAAA 
GTGGCGCGCG CGATTTTGCA GGACAGCGGC ATTCAACAAA GCGGTGTAAA TATAATTTCG 
TGTCCTACTT GCGGACGTTT GCAATGTGAT TTGGTAACTG CCGTCAAAAA AATAGAAACT 
TCGTTAAAAG ATATTAAAGC GCCTTTAAAT GTATCAGTTA TGGGTTGCGT TGTAAATGCG 
ATAGGCGAAG CGAAAGGAGC GGATGTGGCG ATTGCATTCG GCAAAGGAAA CGGCTTAATA 
ATAAAAAAAG GTAAAATCGT AGCAAAATTA AGTGAAAACG AGCTTGTAGA AAGATTTTTG 
GAAGAAGTAA AAAATGAGGC GGAAAAATAT GAATAA
 
Protein sequence
MRYKTKKIFA GNVAIGGDAP ISVQSMTFSK TKDIKATLEQ INRLYFAGCD IVRCAVLDNK 
DAEALEEIKK ESPLPIVADI HFNYRHALKT AKFVDAIRLN PGNIGGSERI KAVVGACKER 
NLPIRIGVNS GSLEEKFEKK YGRTPKGMVE SALYNIDLLE KENFTDIVVS LKSSDTIKTI 
KAYKALRKKC EYPFHLGVTE AGTEFHATIK SAIALGNLLI AGIGDTIRVS ITGELEKEIK 
VARAILQDSG IQQSGVNIIS CPTCGRLQCD LVTAVKKIET SLKDIKAPLN VSVMGCVVNA 
IGEAKGADVA IAFGKGNGLI IKKGKIVAKL SENELVERFL EEVKNEAEKY E