Gene CHAB381_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0949 
Symbol 
ID5409406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp884642 
End bp886435 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content32% 
IMG OID640870636 
Productgeneral glycosylation pathway protein 
Protein accessionYP_001406510 
Protein GI154148308 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.266256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTCA AGCCAACAAA ATTTAAAAGA TTTACATTTT TTTTATTTGT TGATATTTTA 
ATCAGTATTC TTTCAGTATA TATCGCTTTT TTGCTTCGTT TTAGCGGCGA TATACCGAAT
GAATTTTATA AAGGTGCTTT ACTTAGCACA TTTGTAATTA CGGCGTTTCG TATATTTTAT
ATTTGGCTTT TTAGAATTTA TATGGTTCCA TGGCGATTTT TCGGACTTTA TGAAGCTAAA
AAGCTCTTTT ATATACATTT ACTGACAGCA ATCAGTTTTA CAATTATTTT TACTTTTTTC
AGCTATATAT TTAATCCTTT TCCACGCAGT GTTATCGTTA TAGACGCTGC AATTTGTTAT
TTGCTTATCA GCGGAATTCG CATTTCAAAA AGAATGTTTT TAGACAGCAA AAAAGATCTT
ACAAACAACG AACCTTGTTT GGTTGTCGGC GCTACGAGCA AAACTTTTCA AGTTTTAAAA
GGAATGAGAA GAAAATATAT AAATTACTAT CCTGTCGGCG TAGTTGACGG TAGAGCTGAA
TTGGTAGGCA CATATTGTGA AAATTTTGTA GTAAAAAGCA AAGATAAAAT TCCAAAAATC
ATAAAAGAAA CAGGCGTAAA AACGGCTATT ATAGCTTTGG CGCTTGATCC GATCGATTTA
AAAGATTTGT ATGATGAGTT AATCAATTAC GGTTTAAAAG ATATAAAAAT TTTTTCACTT
ATTGAAAATG AAAAAGATAA AATTAGAGAT ATTTCAATTG AAGATTTACT TGCAAGAAAA
CCAAAAGATC TGGATAATAA AGCAATTGAA AAATTCATAA AAGACAAAGT TGTAATGGTA
ACCGGAGCCG GCGGCACAAT AGGAAGTGAA ATTTGCAAAC AATGTCTGAA ATTTGGTGCA
AAACGCCTTA TAATGGTGGA TCATAGCGAA TATAATCTTT ATAAAATCGA TCAGGAAACG
AATCAGGATA AGCGAAATGT TTTAAAAATG ATGAATATTA TTCATTATGA CGAATTTCGC
GCTGTTTTTG AAGAATTTCA TCCTGAAGTT ATAGTTCATG CAGCTGCTTA CAAACATGTA
CCGATGTGCG AATACAATCC GTTTCAGGCA ATAGAAAATA ATATTTTAGG TATGAAATAT
TTGACCGATT TGGCAATTGA GTTTAAAGTT AAAAAACTCG TTTTAATCTC AACAGATAAA
GCTGTAAGAC CAACCAGCAT AATGGGTACA ACAAAACGCA TTTGTGAGCT TTACGGACTA
AACTCATCTA CAAATGATAC TCAAATTGTA GCAGTTAGAT TTGGAAATGT GCTTGGAAGT
AGTGGCAGCG TGATTCCAAA ATTTAAAAAA CAGATTGAAA ATAACGAACC TTTAAGCGTA
ACTCATCCGG ATATTGTAAG ATATTTTATG CTTGTCAGTG AAGCTTGCCA GCTTGTGCTT
CAAGCAGCTT CCATCGCGAA AGGTGGCGAA CTTTTTGTGC TTGATATGGG TGAACCGGTT
AAAATTGTCG ATTTGGCAAA TCGTATGCTT CAACTTGCTG GAAAACCTAA TTTGGGTATA
AAATTCGTAG GACTTCGTCC GGGAGAAAAA CTTTTTGAAG AGCTTATTGT TGATGAAAAC
GACAAAATGA CGGAGTATAA ATCAATTTTT GTAACGCATT CAAATAAATA TGATATAAAC
AAATTAAACG AACAAATAAA AGAGCTTTTG AAACTGAAAA CAACAGATGA AATTGTAAAT
TATTTAACTC AAATTGTTCC TGAATTTCAT CACAATAAAG GCGGTCAATG TTAA
 
Protein sequence
MIFKPTKFKR FTFFLFVDIL ISILSVYIAF LLRFSGDIPN EFYKGALLST FVITAFRIFY 
IWLFRIYMVP WRFFGLYEAK KLFYIHLLTA ISFTIIFTFF SYIFNPFPRS VIVIDAAICY
LLISGIRISK RMFLDSKKDL TNNEPCLVVG ATSKTFQVLK GMRRKYINYY PVGVVDGRAE
LVGTYCENFV VKSKDKIPKI IKETGVKTAI IALALDPIDL KDLYDELINY GLKDIKIFSL
IENEKDKIRD ISIEDLLARK PKDLDNKAIE KFIKDKVVMV TGAGGTIGSE ICKQCLKFGA
KRLIMVDHSE YNLYKIDQET NQDKRNVLKM MNIIHYDEFR AVFEEFHPEV IVHAAAYKHV
PMCEYNPFQA IENNILGMKY LTDLAIEFKV KKLVLISTDK AVRPTSIMGT TKRICELYGL
NSSTNDTQIV AVRFGNVLGS SGSVIPKFKK QIENNEPLSV THPDIVRYFM LVSEACQLVL
QAASIAKGGE LFVLDMGEPV KIVDLANRML QLAGKPNLGI KFVGLRPGEK LFEELIVDEN
DKMTEYKSIF VTHSNKYDIN KLNEQIKELL KLKTTDEIVN YLTQIVPEFH HNKGGQC