| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0932 |
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| Symbol | ispDF |
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| ID | 5409534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 867622 |
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| End bp | 868737 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640870619 |
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| Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
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| Protein accession | YP_001406493 |
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| Protein GI | 154148625 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGACA TTACGCTGGT TTTGCTTGCA GCAGGAGATT CAACACGCTT TAAAGCGCCT
TTTAAAAAAC AATGGATTCG AATCGGCGAA ATACCGCTTT GGCAATATGT AGCAAAAGAT
TTAAGTCAAA AATGCGATTT TAGCGATATT ATAATTGTCG CAAACGAAAA AGAAATTTCA
TATATGAAAA AAATAGAGCG AAATTTCAAA TACGCAAAAG GCGGCAAACT TCGCCAAAAT
TCGCTTGCAA ATGCCCTTAA AAAGGTGAAA AGCGAATTTG TATTTGTTAG TGATACGGCG
CGAGCCGAAA TTTCAAAAGA TCTTATCGGG CGTTTAATAA ATGAATGCGA AAAATTCGAT
TGCGTCAGCC CATTTTTAGG CGTTGTTGAT ACCACGTATC TTGGAAGAAA TCAAATCGAC
AGAAACGATT TAAAACTTAT CCAAACTCCG CAAATTTCTC GCGCGAATTT ATTAAAAAAA
GCACTTGAAA GCAATGAAAT TTTTACTGAT GATAGCGCCG CCGTAGCTTT TGCAGGCGGG
AAATTGGGAT TTGTAGAAGG TGATGAAAAA GCCCGTAAAA TTACATTTAC GAGTGATTTG
GCTCATTTTG ATTTTACACC TGCGAGCGGT ACAATTTTTA CAGGAAACGG ATTTGACGTG
CACGCATTTG CAAAAGGCGA GTTTATAACG CTTGGTGGCG TTAAAATTCC TTGTGAATAT
TCGCTTGTAG GGCACAGCGA TGCCGACGCG GCGATTCACG CTTTGATGGA CGCGATTTTA
GGAGCTTGCG GACTTGGCGA TATAGGTGAG CTTTTTCCGG ATACTGACGA TAGTTTCAAA
GGAATCGATA GCAAAATTTT ACTTCAAAAG GTTGTAAATT TTGTGCATTT GCTTGGATTT
AAAATCATAA ACGCCGACAT TACGATAATC GCTCAAAAAC CTAAAATTTC GCCATATAAA
GAAAAAATGT GTGAAATTTT AAGTGAAATT TTGCAAACTT CACGCGTAAA TGTAAAAGCT
TCAACTACTG AAAAATTAGG CTTTGTAGGT CGAGTAGAAG GTGTAGCGGC AATTGCAAGC
GCCAATTTGG GATATTTTGA TTGGAGAAAA TTTTAA
|
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| Protein sequence | MKDITLVLLA AGDSTRFKAP FKKQWIRIGE IPLWQYVAKD LSQKCDFSDI IIVANEKEIS
YMKKIERNFK YAKGGKLRQN SLANALKKVK SEFVFVSDTA RAEISKDLIG RLINECEKFD
CVSPFLGVVD TTYLGRNQID RNDLKLIQTP QISRANLLKK ALESNEIFTD DSAAVAFAGG
KLGFVEGDEK ARKITFTSDL AHFDFTPASG TIFTGNGFDV HAFAKGEFIT LGGVKIPCEY
SLVGHSDADA AIHALMDAIL GACGLGDIGE LFPDTDDSFK GIDSKILLQK VVNFVHLLGF
KIINADITII AQKPKISPYK EKMCEILSEI LQTSRVNVKA STTEKLGFVG RVEGVAAIAS
ANLGYFDWRK F
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