Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0928 |
Symbol | |
ID | 5408316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 863628 |
End bp | 864806 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640870615 |
Product | aspartate aminotransferase |
Protein accession | YP_001406489 |
Protein GI | 154148384 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.436477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGG AGTTATCGAA CAGAGTTCAA ATTTTAAGTG AATCTATGAC AATCGCTATC AGTTCGCTGG CACGCTCAAT GAAAGCCGAT GGCGAAGATG TAATCAGTCT GAGTGCAGGA GAACCTGATT TTGACACACC AAAAGCCGTA AAAAAAGCTG TAATCGAAGC TATGGAAAAA GGAGCTTCAA AATATACTGC AAGTGCCGGC ACACCGGAAT GTTTAAAAGC GGTAGCCTAT AAGTTGAAAA ACGAAAATAA TTTAAATTAC AGCACAAGCG ACATTATTAC AAGTGTAGGT GCAAAACACT CGCTATTTAG TGTATTTTCA GCGCTTATAA ATAAAGGCGA TGAGGTTATA ATTCCGGTTC CTTATTGGGT AACTTATCCG GAAATCGTAA AATATTGCGG CGGCGTGCCT GTTTTTGTGC AAGGTGATAA AAACAATAAA CTGAAAATTA CGGCAGGTGA TCTTAAAAAA GCCATCACTC CTCGCACGAA AGCCTTTGTA ATAGGTTCGC CAAGTAATCC TAGCGGATCA GTTTACAGTA AAAAAGAGCT TTTGGAATTT GCCGATGTTT TAAAAGATAC AAATATCACT GTCATAAGCG ATGAAATTTA TGAAAAAATA AATTACGTAG GCGATTTTGT ATCCGTTGCA GCGCTAAATG ACGATATGTT TGAAAGAACA ATTACGATAA ACGGACTTAG CAAAAGTGCA GCTGTGACAG GTTGGCGTTT CGGATATCTT GCAAGCCCAC AAAAAAATCT AATCGCAGCC ATTAAAAAAT TGCAAAGTCA AAGCGTTTCA AATATAAGCT CAATCGTGCA AGCAGGCGCA ATTCCTGCAC TTTTAGGAAA ATGCAACGAA GATGTTAAAA AAATGCTTGC GGCATACAAA GAAAGAAGAG ATTGGTTTGT GAATGCAATA AACTCTGTTT CAGGACTATC TGTAATAAAA CCGGAAGGCG CTTTTTATCT ATTTGTTGAT TGCGGTGAAG TAGAAAAAGA CAGCTTGAAA TTTTGTAAAA AATTGTTAGA AAATGAAAAA GTTGCAACTG TTCCAGGAAT TGGCTTTGGA ATGGACGGAT ATTTCAGGGC AAGTTTTGCT ACTGATTTGG AATCTATAAA AAAAGGCTTT TCTCGTATAG AAAATTTTGT AAAAAACTAT AAAGCTTAA
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Protein sequence | MKLELSNRVQ ILSESMTIAI SSLARSMKAD GEDVISLSAG EPDFDTPKAV KKAVIEAMEK GASKYTASAG TPECLKAVAY KLKNENNLNY STSDIITSVG AKHSLFSVFS ALINKGDEVI IPVPYWVTYP EIVKYCGGVP VFVQGDKNNK LKITAGDLKK AITPRTKAFV IGSPSNPSGS VYSKKELLEF ADVLKDTNIT VISDEIYEKI NYVGDFVSVA ALNDDMFERT ITINGLSKSA AVTGWRFGYL ASPQKNLIAA IKKLQSQSVS NISSIVQAGA IPALLGKCNE DVKKMLAAYK ERRDWFVNAI NSVSGLSVIK PEGAFYLFVD CGEVEKDSLK FCKKLLENEK VATVPGIGFG MDGYFRASFA TDLESIKKGF SRIENFVKNY KA
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