Gene CHAB381_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0794 
Symbol 
ID5407976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp735450 
End bp740000 
Gene Length4551 bp 
Protein Length1516 aa 
Translation table11 
GC content36% 
IMG OID640870487 
Productouter membrane protein 
Protein accessionYP_001406365 
Protein GI154149537 
COG category[W] Extracellular structures
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112166 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTAT ATGAAAAAAA TAAGGAGTTA TTTTTTATGA GAAAAATTTT ATCTATGATG 
ATAAGCATTT GCGCTGCAAA TGCTTTGTTT GCAAGCAGTT TATATACCAT ACGAGATGGT
AAATTATTTG AAGTTGAAAG AACTTACTCT GGAACATATA GAACTAAAAT TGGTTATAAT
CCAGTAAATG AGTCTGAAAT CTTAGTATTA TCAAATTTTA ATGATATAAG CATAGCATTT
GGAGATGGTG CATATGCTGA TGATACAAAG CCAGGTGGGG GTGGCATTGC TATAGGAGTA
CGTGCTCGGG CTAAGCGAGA TCCAAGCGTA TCTGGTCCTG GAGAGGGAAA TATTGCTATT
GGAAATGATG CACGAGCGAC TGGACACATG GCTATAGCTT TAGGTAGCAA CTCAAAGGCA
GAACGACAGC ACTCTATTGC TATAGGATTT GGTGCAGATT CTTCAGGAAA AGACCACTCA
GTAGCAGTTG GACAAAACTC AAAAGCTACA GGGTTAGAAT CTTCTGCTTT TGGAAGTTTT
GCAAAAGCGC TTGGTGAACA TAGTGTTGGT ATTGGATATG GGGCAACAGC AGAGGGGCGA
GTTAGTATCG CATTAGGACA AGGTGCTAAA GTCACAGGAA GTGAGCAAGG ATCCACTGCT
ATAGGTTGGG AAGCAATAGC CTCTGGAGAA TTTGCTAATG CTATAGGAAA AAAGGCTAAT
GCTAGTACGC ATTCCAATGC TATAGGATTT GGGGCACAAT CTTTAAACCA ATCCAGTGCC
ATAGGCGAAG CTGCATATTC TAAAGGAAGG TATTCAAGCG CTATAGGTCA TCAGGCTAGA
AGTTACGCTA ATGATTCAGT AGCTATTGGA AGTAACGCAG TTACATACGG CAGAGATAAA
AATACATATA CCTCTGCATA TAGCTCTATA TCAATAGGAG AGTTTGCAAG AGCTGGCTTA
AGTGAAAAGC TAACCCAGTC AGAGTATGAT GAGTTAGATG GCAGATTACA AAAGAATTAT
TATGTAAAAG ATGGAAACGG GTATAAACTA AAACCTTTTG ATATTGAAAG TGATCGAGGC
AATATAGCTA TAGGTACCTA CTCATTAGCA ACTTCTATTA GATCTGTTGC TATAGGAATT
GGTGCAGAAT CTATGAGTTC TAATGCAGTT TCTTTAGGTT ATGGTTCTAA GGCTCTTTGG
AATGATTCCA CAGCCCTAGG AAGCAAGGCG AAAGCCATGG CTAACTATAG CACTGCCGTA
GGATATGGAG CTTTGGCACG CTCAGAAAGA TCAGTCTCAG TAGGATATGA GGCTAAAGCA
CGCTCAGAAA AATCAGTCTC AGTAGGATAT GAGGCTAAAG CAGGTCTTGA AGAAGAGCTT
GATGAGAGTA GATATAACTC ATTAGCTGAT ACTTATAAAC AATACTACAA AAAAGATAAT
GGAAAATATA AGCTTAAAAA TTCAAACCAA AATAATATCG CTATAGGATA TAATTCTGAA
TCCTTAGGTT CAAGCTCTTT AGCTTTAGGA TATGGATCTA TGGCAGCCAA GGACCATGCA
ATATCACTTG GGACAAAATC AAATACTCAA GGAAGTTATG GCATATCAGT AGGACATGAG
GCTAAAGCTT CAAATGACAA TTCTATAGCT TTGGGCTATC AAGCCAGTGC GCAAGAAAAT
AACTCTGTTG CACTTGGTGC AAGATCAGTA GCGAGCACAG GTCGTGGAGT TACAGGCCTT
GACTTTGCAA CTAACAATCC AAGCAAAGAA ACAGACTCTG CTTGGAGAAG CACAGCAGGA
GCGGTATCTG TAGGTGATAA AGCCAACAAT ATTACTCGTC AAATCACAAA TGTCGCAGCA
GGAACTAATG ATACCGATGC AGTCAATGTC GCTCAAATCA AGTCTTTAGC CAATCAAGGC
TTTCATACAC GAGCTAATTA TAATGCTACA GATATAACAA AGGGAAATGA TGTTTCTCAT
AAACTTGGTG GAATTATAAA AGTAGGTGGC GGCTTTAAAC TTACAGGTAG CAATAAGAAC
TTAAATGATT TTCTAAGCAG CGAAAACTTA GCCACTTCAA TTAACAAAGA TGGAAGTATA
AATTTACTTA TGGCTAAAAC TCCAACATTT AATGATATTA ATATCTCAAA AGATGGCAAA
GGTGGAGACT ATACAAGTTT AACTCAATGG ATTAAAGGCA TAGAAAATTC AAGCTCTACA
AATAGTAATA TAAAATATTT CTCTGTAAAA TCAAAAGAAG ATAAAGGAAA TTTTGATAAT
AAGGGTGCCA CAGGTGATTA TGCCATAGCC ATTGGACCAG ATACTACAGC AAAAGGTAAT
TCAGCAATTG CTGTAGGCAA TAATGCAAAC GCAGATTCTA TAAATTCAAT AAGTATAGGA
GAAAAAGCAA AAGCTATAGG AAACAATTCA ATATCTATGG GTTATCAAGC AGAAGCATAT
GATAAATCTA TGTCTATAGG TTATTTTTCA AAAGCAAAAG GACTTGACTC AATAGCAATA
GGTGGTAATG CAGAAGCTAG TGGATTAGAT GGAAGCGGCA AATTTTCAAG AAGCGTCGCT
ATAGGTCAAA GTGCAAAAGC AACAGGTTAT GAATCAAATG CCTTAGGACA TTCAGCAGAA
GCTTCAAAAG ATGAAGCAAC AGCTATTGGA GTAGAAGCAA CAGCAACAGA AAAACACTCT
ACAGCTTTAG GTGCTAGAGC TAGAGCTCTT GGCGAAAAGT CAATCGCAAT AGGCAATCAA
AACTATTCTA GAGCATACTC ATCTATAGCA ATAGGTCATC ATACAGATGC TAAAGGAAAT
TTATCAATTG CTTTAGGGGA AAAGTCAAAA GCGCAAGCTG ATTTTTCAAC CGCAATCGGC
TCTCATTCAA TAGCAAAAGA GAAAAATTCT CTAGCCTTAG GCGTTGGATC ACAAGCAAAT
ATAAACAACT CTGTAGCTTT AGGTGCACTT TCTATAGCAG ATACTGAAGC AGGTAAAGAG
GGCAAATATT TTGGAGTTGG TAAAAATGAT GATAAAGATA CTGCTGCTTG GACAAGTAGG
CTAGGAGCAG TATCGGTTGG TAGAGCTAAA GGATATAAGG ATAATAAAGG TAATGATTTG
TCAGAATTAA CTCGTCAAAT CACAAATGTT GCAGCAGGAA CTAATGATAC CGATGCAGTC
AATGTCGCTC AACTTAAATC TTTAAAAGAT TATAGTGATA AAACTTTTGC AAAACAAACC
GATCTAGAAA AAATACAAAA AAATCTAAAT GGTAAAATTT TTGATATAAA AGGAGACAAT
AAAAACATAG TAGTTGAACA AGAAGGTACT ACTAGTAACT CTAAAAAAAT AAGTCTAGCT
AAAGACCTTA AAGATTTACA AAGTGCTGAA TTTAATAAAT ATGATAAAAA TGGTAATGCT
GTAGCAGATA AAACTACTAT AAATAATGAA ACAATAGAAA TTGGAGATGA TAAAATAAAA
GCTAAAATTT CAAAAAATGA AATAGTTTTA TCAAATGAAA ATAACAATAA AAGCATTACT
ATTAAAAATG ATGATAAAGG ACAGCATATA GTAGGTCTTA GCAATACAAA GTGGAATGGA
ACAACCGATG ATGTAAGTAG AGCTGCTACA GAGGGTCAGC TTAAAGAACT TCAAGAAAAC
TTTACAACAA ATTTAAATGG CACAGTAAAT CAAACACTAG GAAAATACAA ACTTAAAGGA
GATGAGGGAA AGCATAATAT TTATGGCAAC GAAACTTTAA CTATAAAAGG TGATAAAAAC
ATTAAAACAA AAGCTACAGA AGATGGAAAT TTAGATATAA AGCTTTCAAA AAATTTAGAT
CTAAAAGATG GTTCTATAAC ACTTAATAAC GCAAAACTTG ATGAAGACGG TTTAAAAGTT
GGAGATGATG TTAAAATCAC AAAAGATACT ATTCAAAATG GTGATGTTAA ACTTACCAAA
GATGGTCTTA ATAATGGTGG TAATAAAATA ACAAAAGTAG CCGATGGAGA AGCTGATGAT
GATGCTGCTA CTGTGGGACA ATTAAAAAAT ATAGCTGTTG GTGCTAGTGG AGTAAAAGAA
AGTGATAAAA AAGATGACTG GGCTAAAGAA AAACCAAAAG CAACTGGTAA AAACTCAGTT
TCTATAGCCG GTGGATCGAA AGATAATGGT AGAAGCAACA CAGTATCAGT AGGAGCTCCT
GGACATGAAA GAACTATAAG CAATGTCGCT CCTGGTGTTC TAAACTCAGA CGCAGCTACT
GTAGGACAAC TCAAAGCGGG ACTAAACAAT GTTTACGGAA AGCTTGACGA ATACAAAAAA
GATTCTCGCG CAGGAACAGC CTCAGCTATG GCTATAGGAA ATCTTCCACA ATCTACAATT
CCGGGAAAAG GAATGGTCAG TTTAGGAGGC GGTTTTTATG ACGGTGAGTC GGCTATGGCA
ATCGGCTTAT CAAAAATGAG TGATGATGGA AAATGGGTAG TAAAAGGCAG TGCAAGTTAT
GATTCACAAG AAAATGCAGG AGCCGCAGTA TCTGTCGGCT TCCATTTTTA A
 
Protein sequence
MVLYEKNKEL FFMRKILSMM ISICAANALF ASSLYTIRDG KLFEVERTYS GTYRTKIGYN 
PVNESEILVL SNFNDISIAF GDGAYADDTK PGGGGIAIGV RARAKRDPSV SGPGEGNIAI
GNDARATGHM AIALGSNSKA ERQHSIAIGF GADSSGKDHS VAVGQNSKAT GLESSAFGSF
AKALGEHSVG IGYGATAEGR VSIALGQGAK VTGSEQGSTA IGWEAIASGE FANAIGKKAN
ASTHSNAIGF GAQSLNQSSA IGEAAYSKGR YSSAIGHQAR SYANDSVAIG SNAVTYGRDK
NTYTSAYSSI SIGEFARAGL SEKLTQSEYD ELDGRLQKNY YVKDGNGYKL KPFDIESDRG
NIAIGTYSLA TSIRSVAIGI GAESMSSNAV SLGYGSKALW NDSTALGSKA KAMANYSTAV
GYGALARSER SVSVGYEAKA RSEKSVSVGY EAKAGLEEEL DESRYNSLAD TYKQYYKKDN
GKYKLKNSNQ NNIAIGYNSE SLGSSSLALG YGSMAAKDHA ISLGTKSNTQ GSYGISVGHE
AKASNDNSIA LGYQASAQEN NSVALGARSV ASTGRGVTGL DFATNNPSKE TDSAWRSTAG
AVSVGDKANN ITRQITNVAA GTNDTDAVNV AQIKSLANQG FHTRANYNAT DITKGNDVSH
KLGGIIKVGG GFKLTGSNKN LNDFLSSENL ATSINKDGSI NLLMAKTPTF NDINISKDGK
GGDYTSLTQW IKGIENSSST NSNIKYFSVK SKEDKGNFDN KGATGDYAIA IGPDTTAKGN
SAIAVGNNAN ADSINSISIG EKAKAIGNNS ISMGYQAEAY DKSMSIGYFS KAKGLDSIAI
GGNAEASGLD GSGKFSRSVA IGQSAKATGY ESNALGHSAE ASKDEATAIG VEATATEKHS
TALGARARAL GEKSIAIGNQ NYSRAYSSIA IGHHTDAKGN LSIALGEKSK AQADFSTAIG
SHSIAKEKNS LALGVGSQAN INNSVALGAL SIADTEAGKE GKYFGVGKND DKDTAAWTSR
LGAVSVGRAK GYKDNKGNDL SELTRQITNV AAGTNDTDAV NVAQLKSLKD YSDKTFAKQT
DLEKIQKNLN GKIFDIKGDN KNIVVEQEGT TSNSKKISLA KDLKDLQSAE FNKYDKNGNA
VADKTTINNE TIEIGDDKIK AKISKNEIVL SNENNNKSIT IKNDDKGQHI VGLSNTKWNG
TTDDVSRAAT EGQLKELQEN FTTNLNGTVN QTLGKYKLKG DEGKHNIYGN ETLTIKGDKN
IKTKATEDGN LDIKLSKNLD LKDGSITLNN AKLDEDGLKV GDDVKITKDT IQNGDVKLTK
DGLNNGGNKI TKVADGEADD DAATVGQLKN IAVGASGVKE SDKKDDWAKE KPKATGKNSV
SIAGGSKDNG RSNTVSVGAP GHERTISNVA PGVLNSDAAT VGQLKAGLNN VYGKLDEYKK
DSRAGTASAM AIGNLPQSTI PGKGMVSLGG GFYDGESAMA IGLSKMSDDG KWVVKGSASY
DSQENAGAAV SVGFHF