| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0648 |
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| Symbol | |
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| ID | 5408418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 594927 |
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| End bp | 596249 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640870349 |
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| Product | mate efflux family protein |
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| Protein accession | YP_001406230 |
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| Protein GI | 154149433 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.849411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAGC TTTCGTTATT CAAACTCTCA ATAGCAATGT ATATCGAGAT GTCACTCAGA
CTTTTGACAG TTGTTATAAA TACATATATG ATTTCACGCG TAAATGTTCA TTTAATAGGC
GCTCTCGGCG CGGGAAATCA AATTTTTATG CTTTTTATTA CAATTTTCAG TTTTTTAGGT
GTCGGCTGTT CCGTTCTCGT TTCGCAAGCT ATTGGCGCAA AAAACAAATC CCTAGCTTTA
AAAGCAATTC ATATGAGCAT TGCATTCAAT GCGGTTCTAG GCTTTTTTTG CGGAATTTTT
GTGTTTATTT TTTCCGATTT GTTACTTAAA ATTTTGCAAG TTCCAAATGA ACTTTTACAT
GAAAGTAGCG TATATCTGCG CGTTTTAAGT GTAGTTTTTA CAATTGATGC GATAGCTATT
GTAATTTCTG CGATAATTCG CGTATACGGA TATGCAAATC ACATTATGTT TGTAGCGATA
TTTATGAATA TCATCACAAT AATAGGAAAT TATGTAGCAC TTTTTGAACC GTTTGGAATG
CCGTATCTAG GACTTTTTGG TATAGGGCTT TCTACTATTT TCGGTAGAAT TTGCGGCATT
ATTTTATTTT TTATAATTGC CGTAAAAATA GTGCGCGTTC GCTTTTACTT AGTTCTTTTT
TTAAATTTCA ACAAAAACAT TTTACGTAAA ATTTTATCAG TAGGATTACC GAGCGCCGGA
GAAAATTTGC TTTGGACAGT TCAATATATG ATCGCTTTCG GCTTTGTAGC AAGTATGGGA
AAATCAAGTT TAACGGCTCA AACCATTTAT TTTCAAATTT CAGCTTTTAT ATTTTTTGCA
GCAAGCGCGA TAAGCATGGC AAACGAAGTC ATCGTAGGAC GTTTAGTAGG AGCCGGCGAA
AGTGAAAAAG CATATAATCA AACATTCAAA ACTTTAAAAA TTGCACTTGC AATTACCGCA
CTTTTCATAT TTTTAGTATT TATTTCAAAA GAAAAAATAA TGCAAATTTT AAATTTCACG
CCTGAGCTTT CAAATACGAT GAGGCCGCTA TTTTATCTAA CAATAGTGCT TGAAATCGGA
CGAAGCTTTA ATATCATTTT CGTAAATGCG CTTAGAGCAA GCGGGGATGC CAGATTTCCA
TTTTATATGG GATTGATTTT TATGATTGGA GTTTCCATTC CTTTGGGATA TTTTTTAGGA
ATTCATTTAG GGATTGGAAT TTTGGGCGTT TGGATAGGAT TTTGCGCCGA TGAATGGTTA
AGAGGAATCG CTCACACTTG GCGCTGGAAA AGCAAAAGAT GGATAAGCAA AAAATTAGTT
TGA
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| Protein sequence | MKELSLFKLS IAMYIEMSLR LLTVVINTYM ISRVNVHLIG ALGAGNQIFM LFITIFSFLG
VGCSVLVSQA IGAKNKSLAL KAIHMSIAFN AVLGFFCGIF VFIFSDLLLK ILQVPNELLH
ESSVYLRVLS VVFTIDAIAI VISAIIRVYG YANHIMFVAI FMNIITIIGN YVALFEPFGM
PYLGLFGIGL STIFGRICGI ILFFIIAVKI VRVRFYLVLF LNFNKNILRK ILSVGLPSAG
ENLLWTVQYM IAFGFVASMG KSSLTAQTIY FQISAFIFFA ASAISMANEV IVGRLVGAGE
SEKAYNQTFK TLKIALAITA LFIFLVFISK EKIMQILNFT PELSNTMRPL FYLTIVLEIG
RSFNIIFVNA LRASGDARFP FYMGLIFMIG VSIPLGYFLG IHLGIGILGV WIGFCADEWL
RGIAHTWRWK SKRWISKKLV
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