| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0113 |
|---|
| Symbol | pncB |
|---|
| ID | 5409489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 96035 |
|---|
| End bp | 97465 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640869832 |
|---|
| Product | putative nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_001405726 |
|---|
| Protein GI | 154148015 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG CGCTGCTTAC CGATTTTTAT CAACTTACAA TGATGCAAGG TTATTTTTTT
GAAAAAAAAG ATGATGTTGC GGTTTTTGAT ATGTTTTATC GTAAAAATCC ATCAAATGGT
GGATATGCGA TATTTTGCGG TGTCAATGAA GTAGTTGATT ATATTAAAAA TTTAAGATTT
AGCGATGATG ATATTAAGTA TTTAAAAAGT TTAGGGACTT TTAAAGACGA ATTTTTAAAT
TATTTAAAAA CTTTTAAGTT TAACGGCGAA ATTTATGCCG TTGAAGAAGG AAATATAGTT
TTTCCGCACG AACCGTTATT ACGCGTAAAA GCAAATATTA TGGAAGCCCA ACTGATTGAG
ACCGCAATTT TAAACATTTT AAATTTTCAG ACGCTAATCG CAACAAAAAG CTCACGTATT
TGCAAAGCCG CAAACAACGA TTTGGTTATG GAATTCGGAC TTAGAAGAGC TCAAGACAGG
AGCGCCGGAA TTTATGGCGC TAAAGCGGCT GTCATAGGCG GTTGCGGCGG AACGGCAAAT
GTTTTGGCGG CAAAAATGTT TGACATAAAA CCGCTTGGAA CACACTCTCA CTCGTGGATT
CAAAGTTTTG ACAATGAAAT AGATGCGTTT AGAGCTTATG CTAAAATGTA TCCGAATACC
GCACTTTTGC TCGTCGATAC ATATGATACG CTAAAAAGCG GCATTCCAAA CGCCATTAAA
GTTTTTAAAG AACTTCGCGC AAACGGACAC GAACCGCTTG GAATTCGTAT TGATTCGGGC
GATTTGGAAT ACTTGACGAA AATAGCGCGT AAAATGCTTG ACGAAGCCGG TTTTAAAAAT
GCAAAAATTA CAGCTTCAAG CGATTTGGAC GAATATTCTA TCGAACAACT TAAACTTTTC
GGTGCTAAGA TAGATTCTTG GGGAGTCGGC ACCAGACTTA TCACATCACA TGACAGTCCA
AGTTTAGGTG GTGTTTATAA ACTTTCAGGC ATCGAACGAA ACGGAAATTT TGAACCGAAA
ATTAAAATTT CAAATGATCC GCGCAAGATA AATAACCCTG GATACAAACA AGTTTATAGA
CTTTATGATA AGGATAATGG CAAAGCGGTT GCAGATTTGA TTACGCTTGC CGATGAAAAA
ATAGATGAAA GCAAATCGCT TGAAATCTTC CATCCGCTTT ATACGTATCG CCGAAAGAAA
GTTGAAAATT TTACGGCTGA ACCTTTACTG AAACCACTTT TTATAGACGG CAAATTTGTA
GGAAACAAAC GAAGCGTAAT GGAAATCGCA AAATATAGCA AAGAGCAAAA GGCGCTTATT
TGGGATGAAT ATCTAAGAAA CATCAATCCG CAAGTTTATA AGGTCGATAT GTCAAACAAA
CTTTGGAATT TGCGCGAAAA ATTAATCAAT TCACATAAAA ATTTTAATTA A
|
|---|
| Protein sequence | MSEALLTDFY QLTMMQGYFF EKKDDVAVFD MFYRKNPSNG GYAIFCGVNE VVDYIKNLRF
SDDDIKYLKS LGTFKDEFLN YLKTFKFNGE IYAVEEGNIV FPHEPLLRVK ANIMEAQLIE
TAILNILNFQ TLIATKSSRI CKAANNDLVM EFGLRRAQDR SAGIYGAKAA VIGGCGGTAN
VLAAKMFDIK PLGTHSHSWI QSFDNEIDAF RAYAKMYPNT ALLLVDTYDT LKSGIPNAIK
VFKELRANGH EPLGIRIDSG DLEYLTKIAR KMLDEAGFKN AKITASSDLD EYSIEQLKLF
GAKIDSWGVG TRLITSHDSP SLGGVYKLSG IERNGNFEPK IKISNDPRKI NNPGYKQVYR
LYDKDNGKAV ADLITLADEK IDESKSLEIF HPLYTYRRKK VENFTAEPLL KPLFIDGKFV
GNKRSVMEIA KYSKEQKALI WDEYLRNINP QVYKVDMSNK LWNLREKLIN SHKNFN
|
|---|
| |