| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0107 |
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| Symbol | dapF |
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| ID | 5408929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 89982 |
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| End bp | 90800 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640869826 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001405720 |
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| Protein GI | 154149336 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA AAATCTCAAA ATATAACGCA AGCGGAAATG ATTTTGTAAT TTTTGAAAGC
GACTCCTTTC ACAATTATTC AAATTTGGCT CGCAAAATTT GCAACCGTCA TAAAGGAATC
GGAGCGGATG GTTTAATAGT AATCATTAAA AATAAATCTG AAATTTCAAA CAAAATATCA
AGTCTGATTT TAGATTTAAA TAATGACAAA ATAGATTTTG CATGGGATTT TTATAATTCA
GATGGAAGCA AAGCTGATAT GTGCGGAAAC GGTTCAAGAG CAGCTGCGCT TTTTGCTTAT
GAAAATAAAA TAGCAAATAA AAATATGAAA TTTTTAACCG GTGCCGGTAT TATAAATGCT
GAAATTTGCG AAATAAATAA ACATCTGGCA ATAGTTGAAA GTGAATTGAC AAAACCTGTT
AAAAAAGCTG AAAATTTCAG TGAAAACGGT TTTTTATGGA GTTTTTACGA TACCGGTGTT
CCTCACTTGG TTACTTTTGT AAAAGATCTG AATGATTTTA ATATAGAAGT TGCAAGAAAT
TTACGTAAAA AATATAATGC AAATGTAAAT TTTGCAAGCT TTAAAGATGA AATTTTAAGA
GTTAGAACTT ATGAACGCGG AGTGGAAGAT GAGACATTGG CTTGCGGAAC AGGAATGGCT
GCATGCTTTA TAACAGGAGT TATAAATTTT AATCTACAAA ACGTTGTAAA AGTAATGCCA
AAAAGCGGTG AAATTTTATA TTTAAGAAAG AACGATGATA AAGTCTTTTT TAAAGGAGCT
GTGTCTCATA GTTTTGATGC TTTGTTTTAT GATGAATGA
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| Protein sequence | MSIKISKYNA SGNDFVIFES DSFHNYSNLA RKICNRHKGI GADGLIVIIK NKSEISNKIS
SLILDLNNDK IDFAWDFYNS DGSKADMCGN GSRAAALFAY ENKIANKNMK FLTGAGIINA
EICEINKHLA IVESELTKPV KKAENFSENG FLWSFYDTGV PHLVTFVKDL NDFNIEVARN
LRKKYNANVN FASFKDEILR VRTYERGVED ETLACGTGMA ACFITGVINF NLQNVVKVMP
KSGEILYLRK NDDKVFFKGA VSHSFDALFY DE
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