Gene CHAB381_0099 details

Gene Information

• Locus tag: CHAB381_0099
• Symbol: rplF
• ID: 5409689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 84620
• End bp: 85156
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640869818
• Product: 50S ribosomal protein L6
• Protein accession: YP_001405712
• Protein GI: 154148630
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.492804
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TAGGAAAAAA ACCTGTCGCT ATTCCAAGCG GCATTGAGGT TAAAGTTGAT 
GGTAATGTGC TAAAATTTAA AAAAGGTAAC GCACAAAAAG AGCTTGATAC TAAAAATCAT 
GTAGATGTAA AAGTTGAAGA TGGCAAAGTT GAATTTTCAC CAAAAGGTGA AGATAGACAA 
AGCATGGCTT TTTGGGGAAC TTATAGAGCT TTAGCACATA ATATTGTGGT GGGCTTAACA 
GATGGTTTTA GCAAACAACT TGAAATAAAC GGTGTCGGTT ATAAAGCTGC AATGAAAGGT 
AAAATTCTAG AGCTTACACT TGGATATTCT CATCTTGTAA ATTATGAAGT TCCTGATGGA 
ATAGAAATTT CAGTTGATAA AAATGTTATC ACAATTAAAG GTACAGATAA ACAACAAGTA 
GGTCAAGTAG CGGCAATTAT TAGAGATTTC AGAGCACCTG AACCATATAA AGGCAAAGGC 
GTAAAATATC TTGAAGAGCA TATTATCCGC AAAGCCGGAA AAACAGCTAA GAAATAA 

 

Protein sequence

MSRIGKKPVA IPSGIEVKVD GNVLKFKKGN AQKELDTKNH VDVKVEDGKV EFSPKGEDRQ 
SMAFWGTYRA LAHNIVVGLT DGFSKQLEIN GVGYKAAMKG KILELTLGYS HLVNYEVPDG 
IEISVDKNVI TIKGTDKQQV GQVAAIIRDF RAPEPYKGKG VKYLEEHIIR KAGKTAKK