Gene CHAB381_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0045 
Symbol 
ID5409411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp41881 
End bp42813 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content37% 
IMG OID640869768 
Productglycerate dehydrogenase 
Protein accessionYP_001405667 
Protein GI154148917 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG TTTGCCTGGA CGCCGATACT TTGGGCGTTG ATGCTGATTT TAGCGCTTTA 
GAGGCGCTTG GCGAATTTAT AAGTTACAAA AATACAAAAA ATAGCGAAAC TATAGAGCGC
TTAAAAAATG CCGATATCGT CATCACAAAC AAGGTTTTAA TTACAAAAGA AGTTATTGAA
AATACGAATT TAAAAATGAT AGCTATCAGC GCAACCGGCA TGAATAATGT GGATTTAAAA
GCCGCCGCAG CTAAAAACAT CACGGTTAAA AACGTAGCAG GATATTCGAC AAACAGTGTC
GTACAACAAA CTTTCGCAAG TTTGTTCGAG ATGTTAAATA AAGTCAGCTA TTATTCTTCT
TACTGCAAAA ACGGCGAATG GGCTAAAAGT GAAATTTTTA CTCATTTAAG CAGCCCGATA
ACTGAAATTT TCGGTAAAGA ATTCGGCGTA GTAGGACTTG GTGCAATAGG CAAAAACGTA
GCCGAAATTG CTTCCGCTTT TGGTGCAAAT GTCAGATATT ATTCAACAAG CGGTATGCAC
GAAGATGATA ATTTTATAAG CGTAAGTTTG GATTCGTTAC TTAAAACAAG TGATATTTTA
AGTATACACG CGCCACTTAA TGAGCGCACA AAAAATTTAA TCGGCGAAAA TGAAATCGCA
AAAATGAAAG ACGGTGCGAT TTTGATGAAT TTCGGACGTG GTGGCATTGT AGATGAAAAT
GCTCTTGCAA AAGCTGTGGA TGAGAAAAAT TTACACGTTA TTCTGGACGT TTTGGAAATT
GAACCGATGA AAGAAAATCA CCCGCTTTTA AATGTGAAAA ACGGACAAAA TGTTTTGATT
ACGCCGCATA TTGCATGGGC AAGCGTTGAA GCGCGCAAAA AATTGGTTGA ATTGTTGGTA
AAAAATATAA AGGATTTTAT AAATGGCAAA TGA
 
Protein sequence
MKIVCLDADT LGVDADFSAL EALGEFISYK NTKNSETIER LKNADIVITN KVLITKEVIE 
NTNLKMIAIS ATGMNNVDLK AAAAKNITVK NVAGYSTNSV VQQTFASLFE MLNKVSYYSS
YCKNGEWAKS EIFTHLSSPI TEIFGKEFGV VGLGAIGKNV AEIASAFGAN VRYYSTSGMH
EDDNFISVSL DSLLKTSDIL SIHAPLNERT KNLIGENEIA KMKDGAILMN FGRGGIVDEN
ALAKAVDEKN LHVILDVLEI EPMKENHPLL NVKNGQNVLI TPHIAWASVE ARKKLVELLV
KNIKDFINGK