Gene CHAB381_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0042 
SymbolnifS 
ID5409405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp38443 
End bp39633 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content41% 
IMG OID640869765 
ProductNifS family cysteine desulfurase 
Protein accessionYP_001405664 
Protein GI154148303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03403] cysteine desulfurase, NifS family, epsilon proteobacteria type
[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTT ATTTAGATAA TAACGCTACA ACGATGATAG ACCCTGAAGC AAGAGAGCTT 
ATGCTGCCTT TTTTGAACGA GAAATTCGGT AATCCGAACT CACTTCATGA TTTTGGCAGC
GAAACTCACC CGGCACTCCG TAAGGCTATG GATCAGCTAT ATACTGCACT AAATGCCAAA
GATAGCGATG ATATCATAGT TACAAGCTGT GCGACTGAGA GTAATAACTG GGTTTTAAAA
GGCATCTATT TTGATAAAAT TATCACCGGT GAAAAAGATA ATATCATTAC TACATCGGTT
GAACACCCTG CGATTGGCGA AACATGCAGT TTTTTGGAAA CTCTTGGTGT AAAAATTATT
CGTCTTGGCG TAAATACGGA CGGAAATATA AATTTAGACG AATTGAAAGA AAAAATTAAC
GATAAAACCG CACTTGTGAG TATAATGTGG GCAAATAATG AAACGGGCAC GATTTTTCCT
ATCAGGGAAG CTGCCGAAAT TGCTCACGCT CACGGAGCGC TTTTTCACAC GGACGCTACG
CAAGCGGTTG GCAAAATAAA AGTAAATGTT CAAAAAGAAG ATATGGATTT TATGAGTTTT
TCAGGGCATA AATTTCATGC GCCAAAGGGC GTAGGTGCGC TTTTTATAAA AGACAGTATT
CCGCTTACCA GTTTGCTTCA CGGCGGCGAA CATATGGGAG GACGTAGAAG CGGCACATTA
AATGTGGCAG GAATCGTGGC TATGGGAAAA GCTATTGAAA TTGCGGATAA ATTTATAGAC
TTTGAAAACT CGCATATTAG ACGTTTGCGT GATAAACTTG AAAATGCTCT GCTTGAAATT
CCGGATGTTG GCGTTGTCGG CGATAGAAAA TTTCGCGTTC CAAATACAAT TTTAGCTTCC
ATTAAAGGTG TTGAAGGTGA AGCCATGCTT TGGGATTTGA ATAAAGCAGG CATTGCAGCC
AGCACCGGTT CGGCCTGTGC CAGTGTTACA CTTAAAAGCA ATCCTATCCT GGAAGCAATC
GGCGCGGATA AAGAGTTGGC GCATACGGCG CTTCGTTTGT CACTTTCGCG TTTTAACACG
GAAGCTGAGA TTGATTATGC AATTTCTCAT ATCAAATCGG CAATCAACAG ACTTCGTTCT
ATTTCAAGTA CATTTGCTTA CGCACCGGAT GGTTATAAAA GCGGATTATA A
 
Protein sequence
MRVYLDNNAT TMIDPEAREL MLPFLNEKFG NPNSLHDFGS ETHPALRKAM DQLYTALNAK 
DSDDIIVTSC ATESNNWVLK GIYFDKIITG EKDNIITTSV EHPAIGETCS FLETLGVKII
RLGVNTDGNI NLDELKEKIN DKTALVSIMW ANNETGTIFP IREAAEIAHA HGALFHTDAT
QAVGKIKVNV QKEDMDFMSF SGHKFHAPKG VGALFIKDSI PLTSLLHGGE HMGGRRSGTL
NVAGIVAMGK AIEIADKFID FENSHIRRLR DKLENALLEI PDVGVVGDRK FRVPNTILAS
IKGVEGEAML WDLNKAGIAA STGSACASVT LKSNPILEAI GADKELAHTA LRLSLSRFNT
EAEIDYAISH IKSAINRLRS ISSTFAYAPD GYKSGL