Gene Mboo_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2429 
Symbol 
ID5410693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2506409 
End bp2507089 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content61% 
IMG OID640869686 
ProductDNA repair and recombination protein RadB 
Protein accessionYP_001405586 
Protein GI154151968 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02237] DNA repair and recombination protein RadB 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAAC CGGACCGGCA GACCACGGGG AATGCGGCCT TGGACCGGCT GCTGGGCGGC 
GGCCTTGAAC CGCGTACCAT TACCCAGCTT TACGGTGGGC CGGCAAGCGG CAAGAGCACG
CTGTGCATGA TCGCGTCCGT CTCCTGCCTG CGGGCAGGCG GATCGGTAAT CTTCATCGAT
TCCGAGGGCT TCTCCATTGA GCGCTTCCGG CAGATCGCGG GAAACGACAC CGCGGCGATT
GCGGACCGGC TCTTCCTTTT TGAGCCCGTA GACTTTGACC AGCAGGGCGG GATGATCACC
GAATCCGACA AGATCTTCCG GCAGCATAAA CCGGGCCTCG TGGTGCTCGA CTCGGCCACC
GCACTGTACC GGACCGATCT GGAAAAAGGC CGGGACGCCA TGCAGCAGCT CACGCGGCAG
ATGCTCCAGA TCCTCGGGTA CACAAAACGT TACGATCTCC CGGCGCTTGT CACCAACCAG
GTGTATATGG ATACCACCAG AAACACGTTT GCGGGTTTGG GTGGCACCTC GCTTGAACAC
ATCAGTAAGG CAATTGTCCG CCTGGACCGG CTCGAAACGC CCGGATGGCG GCGCGCAACG
CTTGTCAAGC ACCGTTCCCG GCCCGAAGGC GCATCGTTTG ATTTCGAGAT TGTGCAGGAC
GGAATCCGGG CAAAGGAATA G
 
Protein sequence
MTKPDRQTTG NAALDRLLGG GLEPRTITQL YGGPASGKST LCMIASVSCL RAGGSVIFID 
SEGFSIERFR QIAGNDTAAI ADRLFLFEPV DFDQQGGMIT ESDKIFRQHK PGLVVLDSAT
ALYRTDLEKG RDAMQQLTRQ MLQILGYTKR YDLPALVTNQ VYMDTTRNTF AGLGGTSLEH
ISKAIVRLDR LETPGWRRAT LVKHRSRPEG ASFDFEIVQD GIRAKE