| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2422 |
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| Symbol | |
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| ID | 5410498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2494693 |
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| End bp | 2496861 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869679 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001405579 |
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| Protein GI | 154151961 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCA AATCGTTTTC CGGCAGGCTC TCTTCCCTTT TTGAAGATGA TGAGCAAGAC
ACTGTCGTAC CGGAGAGCCC CCCCGGGGAG GGTGGCCCGG ACTGGTCAGG AATCAGCAGG
GATTGGGAAA GTGGAGAGAG CTCGCTGGTC CCTCAGGAAT CAGCCAACCG GCAGCCCTCC
TCGCGTGTCC AGAGATTCAT CCTGTACTTT ATCGAGCCGG AAACGGAGAC AGAGACAAAG
CAGGCTGTTC CCTCACCGGT TCCTGCCGCC GGAAAACCCG AAAAAACGCC GGCAGTCCCG
GTCGGCCGCC GGGTCCGTAT CCGGCTCGCA TCGCTGCGGA CCCTTGGGTC AAAAATTCTG
GTATTTTTTA TCGAACCCGC CCCGGAGGTT CCGGAAGAAG CCGTACCGGT GGGGATTTCT
AATGGTTCTG CGCTTCCGCA GGAGCTCGCT GTTATCCCAC CTCCGGAGCC GGAACCCGTC
CCGGCCACGG CCGATGCAGG GTCGATTGCC GTCGCCGAGC CTCCCAGGCC CTCTTTCATG
CAGAAGATCC GGACAGCATT TGCTGCTCCG GTGCAGAAGG AAATCCTCAC CCTCGATTTC
AACCCGGGCG TCCTTGACAC CCCTTCCCTC GATGGATCCC TGAGGGATGT CAATATCACC
TACCCTATCG ACCCGCCTTA CCAGTATGTG CATATCGAGT ACAGCAAGAA GGACGGCGCC
CTCATCTACG AAGTGGTGGA GCCGCAGCTC TCCGAAGATG AGAAGGTTGC GCTCGATATC
GTGGAGCGGG CCTTTGAGAA GCTCGTGAGC ACCAACCTGG AAGTGATCGA AGGGGACCAG
CGGATCGAGT ACCTCCGGGA GCGGTTCTAT TCCCTGGTTA ACATCTTCGG GCTCAAGCTC
ACCGAGCAGC AGAAGGAGCG GATGTTTTTC ACGCTCAAAA AGCAGTATCT CGGCTACAGC
CGGATCGACA CGCTGATGAA AGACAGGTAT ATCGAGGATA TCAGCTGCAA CGGCTCCGAC
ATCTACCTGT ACGTCCAGCA CCGTATCTAT GGATCCACCC GGACCAACGT GAAGTTCGGA
GAGGTCGAGC TCAACAACTT TGTCCTCAAG CTCGCGCAGA TTGGCGGCAG GCACATCTCA
CTCCTCCAGC CTATCCGAGA TGTCTCGCTC CCTGACGGGA GTCGTGGTAA CCTCACGCTT
GGCGGTGAAG TGACCAAGAA AGGGTCGACC TTTACCATCC GTAAGTTCCG TGCAAACCCG
ATCTCGCCCA TTGAAATGAT GGACTACCAC TCGGTGGATG CTATGGAGCT TGCGTACATG
TGGATCCTCA TGGAGTACAA GCGCTCGATC CTTGTCTCTG GAGGAACTGC CACGGGTAAG
ACCACGTTTT TGAACGTGCT GTGCAGTTTC ATTCCTCCCG AGTACAAGAT CGTCTCCATC
GAGGATACGG CCGAACTCAA CCTCATGCAT CCCAACTGGA TTCAGTCCAT CACGCGTGCA
GGTTTTGGCA GCTCGAGCGG AGGCGAGTCC GTGTCCGGGG TAAGCGGGGT CTCGTCAAAA
AGCCCGGGAG ATATCTCGCT CTACGATCTG CTTGTTGCAG CGCTGCGGCA GCGGCCCGAG
TTCATCATCG TCGGCGAAGT ACGAGGCAGC GAAGCCTTCA CGCTCTTCCA GGCAATTGCC
GTGGGTCATG CGGCACTTGG TACTATCCAT GCCGGCTCCA TGGACGAGCT GCTTGCCCGT
GTGGAGTCAA ATCCGATGAA CGTGCCGCGC AGCCTCTTCT CCAATCTGGA TGTGGTGCTC
TTCCCCATGC ACATCAAGAA AGGGGAGCGG AGCATGAGGC GCCTGGCAAA CATCGTGGAG
ATGCTCGAGC TTGACCGGGA CACGGGGGAT CTTATCACCA ACACCTCCTT TAAGTGGCTG
CCGGACGTGG ACGAGTTCCA GTACCAGGGC CGGAGTTTCC TCTTCGATAA GATCCGGGAC
ACCCATGGGG TGAGCAAGGA TCTGCTCAAC CAGGAGCTCG AGGACCGGAC CGATTTCCTG
CTGGGCCTCC AAAGGGCCGG GATCCGCGAT TACGATGCGG TGACCGAGCA GATCCGGGCA
TATTACCGGG ACAAGCCGGC CGTGATGAAG CAGATTGTTT CTGTTCAGAC CGATGATATG
GAAGAGTAA
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| Protein sequence | MKSKSFSGRL SSLFEDDEQD TVVPESPPGE GGPDWSGISR DWESGESSLV PQESANRQPS
SRVQRFILYF IEPETETETK QAVPSPVPAA GKPEKTPAVP VGRRVRIRLA SLRTLGSKIL
VFFIEPAPEV PEEAVPVGIS NGSALPQELA VIPPPEPEPV PATADAGSIA VAEPPRPSFM
QKIRTAFAAP VQKEILTLDF NPGVLDTPSL DGSLRDVNIT YPIDPPYQYV HIEYSKKDGA
LIYEVVEPQL SEDEKVALDI VERAFEKLVS TNLEVIEGDQ RIEYLRERFY SLVNIFGLKL
TEQQKERMFF TLKKQYLGYS RIDTLMKDRY IEDISCNGSD IYLYVQHRIY GSTRTNVKFG
EVELNNFVLK LAQIGGRHIS LLQPIRDVSL PDGSRGNLTL GGEVTKKGST FTIRKFRANP
ISPIEMMDYH SVDAMELAYM WILMEYKRSI LVSGGTATGK TTFLNVLCSF IPPEYKIVSI
EDTAELNLMH PNWIQSITRA GFGSSSGGES VSGVSGVSSK SPGDISLYDL LVAALRQRPE
FIIVGEVRGS EAFTLFQAIA VGHAALGTIH AGSMDELLAR VESNPMNVPR SLFSNLDVVL
FPMHIKKGER SMRRLANIVE MLELDRDTGD LITNTSFKWL PDVDEFQYQG RSFLFDKIRD
THGVSKDLLN QELEDRTDFL LGLQRAGIRD YDAVTEQIRA YYRDKPAVMK QIVSVQTDDM
EE
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