| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2386 |
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| Symbol | |
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| ID | 5412109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2454744 |
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| End bp | 2456822 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640869642 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001405543 |
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| Protein GI | 154151925 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.934402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCTG AATTCCAGTC TTTATCGGAA AACCTCGGAA CATCTTACCG GAAAACCATT
GCCGCGTTTT CCCAGCATTC AGCCCGGGGC AGCCTGCTCC TTGTTTCGAC AGGGCTTGCA
TCGGCGGCGA CCGGTGTCGG TGTCCTTTTT GTAGATCTGC CCATTCTCCT GATGGGCATC
CTGTCTGTTG TCTCACTGGC CGCACTGATC CTTTTTGTAG CCGGTGTACG GGCGCGTTTC
TTCCCACCTC ATGATCGGCC GATACAGGAA ATTACAGAGC CTGCAGGTTC GAAAATGGCA
AAAGGAGGAA AAATCTCCGG TCTTCCGGCG CCGTGTCTTC GGTTGGTCCG GCTCTTGGGG
AACCGGACCG ACCGCGGCGA TGCGGGGATC CTTGCCATTT TTATCGTAGC AGTCGCGACG
GGGTATACTG CACTCTTTGT GGATCTGCCG CTGGCACTCC TTGTGGCCTC TGGTCTCATT
TCGCTGGTCA TGCTTGTGAC TGTCGGGCTT GCAGCCGGAT TCAGGTTTAT CCCGGAAAAG
ATGATGGCGT TGCTGCCAGA GAGCCGGCAG TACGGGATTC CTATCCAGAA CCCAACCGGT
CAGTCTGCTC GGACCTTTGC CCTCACCCCC TTGGAACCGG GAGGAGATCT CCCGGAAAAA
CAAAGTACCG CGATCCTTGA TGTGTACTGG GTCGAGTCCC CCTTTGCGTA TGTCAAACTT
GCCCGGCAGG GAAACCTCGG TTTTGTGTAC ACGGTGGTCG AGCCGGCACT TTCCCCCCGG
GAGAAAATTG TCCTCCAGGA GACCTACAAC TATTTGCGCG ATGTCATTGT CTTTGACAAC
CCGGAAAAAT CCCCTCAGGA CCTGCTCAGC CGGGAAAACG TCTGGAAGAT CCTTCATGAG
AACGATCCCT CGATCAGCCA TGAGCGCCTC CCCATTCTCG AGTATTATCT TCACCGCGAT
CTTTCGGGTT TTGGGATCCT CGAACCGCTC ATGCATGACC CGGCGCTTGA AGACATCAGC
TGCAATGGGG AAAATCTGCC GGTTTTTGTC TTCCACCGTG TCCATGGAAG CCTGAGAACG
AGCGTTACCT TCCGGAAAGG TGAACTCAAC CAGTTCGTCC TCAAACTCGC CCAGAAAGCC
AACAAGCAGA TCTCGCTTAC CAACCCGATG GTAGATGCTG CCCTTCCTGA CGGTTCGCGG
GTCCAAGTCA CCTACAGCAA TGTCATCTCA ACCAACGGCA GCTCCTTTAC TATAAGGAAA
TTCCGCAGCG ATCCGATGAC TCCGCTGGAC CTGATAAAAT TCGGGACGTA TAACAGCGAG
ATCCTTGCCT TTCTCTGGTT GGTGATCGAG CACCGGAGAA GCCTGATTAT CGCAGGTGGG
ACAGCAAGCG GCAAGACCTC GACCATGAAT GCCCTCTCTC TGTTCATTCC CCTCAATTCA
AAGATAGTCT CTCTTGAGGA TACCCGGGAG ATCCAGCTCC CTCACAAGAA CTGGCTGGCT
ACCCAGACAC GGGAGCTGAC CATGCCAGGA GCGCATGGGG ACGTGGATCT CTTCTCGCTG
CTGAAGTCCT CCATGCGCCA GCGGCCCGAG TACATTATTG TCGGGGAGGT GCGGGGCAAG
GAGGCCCAGA CGCTCTTCCA GGCAATGAAC ACCGGCCACG CGACGCTCTC CACCATCCAT
GCCGGCAGTG TCCAGGAGGC TATCAACCGG CTCACCCACG AACCGATCAA TGTTCCGCCG
GTGATGTTCA CCGCGCTCGA CATCGTGGTC AACCAGGCAG TATTCACTTT TGGCAGCATG
CGGGTACGGC GCTGTTCAGC AATTCATGAG ATCTCTGTTG ACGATCAGGG AAATATCATC
CCGGTCAAAC TATTCGAGTG GGATACGGCT AGCCAGCAGT TCCGTAAAAC AGGAATGAAG
TCGAAAGTTC TTGATGAGAT CGCCGCAATG GGAAACTGGT CAACGGAACA GGTGGCAGAC
GAACTCAGGA GGCGCGAAGA GTTCCTTAAG ATCGCCGTTG ACGTACCCAC TCCGGACATC
ATTGATCTCG CAAACGCTAT CGCAGACCTT GGGGAATGA
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| Protein sequence | MSPEFQSLSE NLGTSYRKTI AAFSQHSARG SLLLVSTGLA SAATGVGVLF VDLPILLMGI
LSVVSLAALI LFVAGVRARF FPPHDRPIQE ITEPAGSKMA KGGKISGLPA PCLRLVRLLG
NRTDRGDAGI LAIFIVAVAT GYTALFVDLP LALLVASGLI SLVMLVTVGL AAGFRFIPEK
MMALLPESRQ YGIPIQNPTG QSARTFALTP LEPGGDLPEK QSTAILDVYW VESPFAYVKL
ARQGNLGFVY TVVEPALSPR EKIVLQETYN YLRDVIVFDN PEKSPQDLLS RENVWKILHE
NDPSISHERL PILEYYLHRD LSGFGILEPL MHDPALEDIS CNGENLPVFV FHRVHGSLRT
SVTFRKGELN QFVLKLAQKA NKQISLTNPM VDAALPDGSR VQVTYSNVIS TNGSSFTIRK
FRSDPMTPLD LIKFGTYNSE ILAFLWLVIE HRRSLIIAGG TASGKTSTMN ALSLFIPLNS
KIVSLEDTRE IQLPHKNWLA TQTRELTMPG AHGDVDLFSL LKSSMRQRPE YIIVGEVRGK
EAQTLFQAMN TGHATLSTIH AGSVQEAINR LTHEPINVPP VMFTALDIVV NQAVFTFGSM
RVRRCSAIHE ISVDDQGNII PVKLFEWDTA SQQFRKTGMK SKVLDEIAAM GNWSTEQVAD
ELRRREEFLK IAVDVPTPDI IDLANAIADL GE
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