Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2340 |
Symbol | |
ID | 5411033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2406778 |
End bp | 2407257 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640869596 |
Product | hypothetical protein |
Protein accession | YP_001405497 |
Protein GI | 154151879 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.663621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTTC GCATTATTGC GGTGGGAAAG ATCAAGGAGC GGTTTCTTTC CGAGGGGATC GCGGAATATA CCAAGCGCCT TTCCCCGTAC CTGAAACTTT CCATTGTTGA AATCCCTGAA GAGCACCGGG GAACCCGGGC CCCGGCCGGC CAGGAAGAGC TTGCAAAAGA GAAAGAGGGC GGGCGGATCC TTGCTGCGAT CCCAGAGCGT GCGTACGTGG TAGCGCTCGA TCTCCGGGGA ACGGAAATAT CCAGCATTGA GCTTGCCGCC CGGATGCACG ACTGGCAGCT TGCGGGTACG AACACGATCG CTTTTGTGAT CGGCGGAGAT CTCGGCCTTT CCGATGCAGT GATCAACCGG GCCGCGTTCC GGCTCTCGCT CTCTCCCCTG ACCTTTACCC ATCCGATGGC ACGCCTGATC CTTGTGGAGC AGCTCTACCG GGCCTGCCGG ATCAACAGCG GCGAGCCCTA TCACAAATAA
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Protein sequence | MQVRIIAVGK IKERFLSEGI AEYTKRLSPY LKLSIVEIPE EHRGTRAPAG QEELAKEKEG GRILAAIPER AYVVALDLRG TEISSIELAA RMHDWQLAGT NTIAFVIGGD LGLSDAVINR AAFRLSLSPL TFTHPMARLI LVEQLYRACR INSGEPYHK
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