Gene Mboo_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2340 
Symbol 
ID5411033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2406778 
End bp2407257 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID640869596 
Producthypothetical protein 
Protein accessionYP_001405497 
Protein GI154151879 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.663621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTC GCATTATTGC GGTGGGAAAG ATCAAGGAGC GGTTTCTTTC CGAGGGGATC 
GCGGAATATA CCAAGCGCCT TTCCCCGTAC CTGAAACTTT CCATTGTTGA AATCCCTGAA
GAGCACCGGG GAACCCGGGC CCCGGCCGGC CAGGAAGAGC TTGCAAAAGA GAAAGAGGGC
GGGCGGATCC TTGCTGCGAT CCCAGAGCGT GCGTACGTGG TAGCGCTCGA TCTCCGGGGA
ACGGAAATAT CCAGCATTGA GCTTGCCGCC CGGATGCACG ACTGGCAGCT TGCGGGTACG
AACACGATCG CTTTTGTGAT CGGCGGAGAT CTCGGCCTTT CCGATGCAGT GATCAACCGG
GCCGCGTTCC GGCTCTCGCT CTCTCCCCTG ACCTTTACCC ATCCGATGGC ACGCCTGATC
CTTGTGGAGC AGCTCTACCG GGCCTGCCGG ATCAACAGCG GCGAGCCCTA TCACAAATAA
 
Protein sequence
MQVRIIAVGK IKERFLSEGI AEYTKRLSPY LKLSIVEIPE EHRGTRAPAG QEELAKEKEG 
GRILAAIPER AYVVALDLRG TEISSIELAA RMHDWQLAGT NTIAFVIGGD LGLSDAVINR
AAFRLSLSPL TFTHPMARLI LVEQLYRACR INSGEPYHK