| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2331 |
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| Symbol | lysS |
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| ID | 5410526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2398552 |
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| End bp | 2400096 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869587 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001405488 |
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| Protein GI | 154151870 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATC CTGCTGATAC CCTTGCATTC GACCAGACCC GGCTCGACAA AGTCCGGGCC
CTGCGGGAGA AAGGCATCGA CCTCTATCCC CCCACCTTTG ACCGGAAGAA TACGATCGCG
GAGATCAGGA CAAAATTCTC AGAGATCACC CACGAGAAGA GTGCCGAGGG CGTTGTTACC
GCAGGACGGC TCTCCATCAT CCGCAACCAT GGCAAGACCA TCTTTGCAGA TCTCGGGGAC
GAAAGCGGCA AGATCCAGCT CTACATCAGG AAGGCAGATC TTGGGGACGA GGCATTCGAC
TTCTTTAACC AGTACATCGA GCGGGGCGAT TTTGTCGGCG TGACCGGGCA CGTCTTCCGG
ACAAAACTGG GCGAGATCAC GATCTGGGTG GACAAAATCC AGCTCCTTAC AAAAGCCGTC
TGCCCGTTGC CCGAGAAGTT CCACGGCCTT ACCGATGTGG AGAAACGCTA CCGGCAGCGG
TACGTGGACC TGATTGCAAA CGAGGAGGTC CGGCAGAACT TCCGGAACCG GAGCCGGATC
CTCTCTTCCA TCCGGCGCTA CCTCTCCGAG CGGGACTTTC TCGAATTCGA AACCCCGATC
CTCCAGCCGG TGTACGGCGG TGCGAACGCA CGCCCGTTTA CCACGTTCCA CAACTGCCTG
GGCCAGAAGC TCTTCCTCCG GATCGCACCC GAGCTGTACT TAAAACGGCT CGTGGTCGGC
GGCTTTGAGC GGATCTTTGA GATCGCACGG AACTTCCGTA ACGAGGACAT TGACACGCAC
CACAACCCCG AGTTCACCAT GGTAGAGATC TACTGGGCGT ACCACGATGT GTATGACATG
ATGGACCTCA CCGAGGATTT CCTGGCAACG CTCGTGCAGG AGGTGCACAA CAAAACGGAG
ATCACGTTTG AGGGCACAAG TATCTCCTTT GCAAAACCCC TGCGCAGACT CTCGATGGCC
GATGCGGTAA AGGAGTACGC CGGGATCGAC ATCTTTGCCC TGTCGGTGGA CGAGCTCCGG
GCCTTTGCAA TCCAAAACAA GCTCAAGGAA GCCGAAAAAC CCCAGACACA GCGCGAGTTC
CTGGTGTACT TCTTCGAGAA CATGGTGGAG GAAAAACTGA TCCAGCCTAC CTTTATCTAC
GATTTTCCCG TGGAGAACTC GCCGCTTGCA AAACGCCACC GGACAAAAGA AGGATTCACT
GAGCGCTTCG AGCTCTTCAT CTACGGCATG GAACTGGCAA ACGGTTTCTC CGAGCTCAAC
GACCCGCTCG ACCAGAAGGA GCGCTTCGAG GCGCAGGACA AAAAACGCCA GCTCGGCGAT
CTTGAAGCCC AGATGATCGA TTACGATTTC ATCAACGCGC TCGGGTACGG CATGCCACCG
ACCGGGGGCG TGGGCATCGG GATCGACCGG CTCGTGATGC TTCTTACCGG CAACAATTCC
ATCAAGGAAG TGATCCTCTT CCCGTCCATG AAGAGCGTTC AGGCAGATGG CGAGGAGGCC
GCCGGGAAAA CTTCCCCCGC GGCCGAACCG GCGCAGAAGA ACTGA
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| Protein sequence | MTDPADTLAF DQTRLDKVRA LREKGIDLYP PTFDRKNTIA EIRTKFSEIT HEKSAEGVVT
AGRLSIIRNH GKTIFADLGD ESGKIQLYIR KADLGDEAFD FFNQYIERGD FVGVTGHVFR
TKLGEITIWV DKIQLLTKAV CPLPEKFHGL TDVEKRYRQR YVDLIANEEV RQNFRNRSRI
LSSIRRYLSE RDFLEFETPI LQPVYGGANA RPFTTFHNCL GQKLFLRIAP ELYLKRLVVG
GFERIFEIAR NFRNEDIDTH HNPEFTMVEI YWAYHDVYDM MDLTEDFLAT LVQEVHNKTE
ITFEGTSISF AKPLRRLSMA DAVKEYAGID IFALSVDELR AFAIQNKLKE AEKPQTQREF
LVYFFENMVE EKLIQPTFIY DFPVENSPLA KRHRTKEGFT ERFELFIYGM ELANGFSELN
DPLDQKERFE AQDKKRQLGD LEAQMIDYDF INALGYGMPP TGGVGIGIDR LVMLLTGNNS
IKEVILFPSM KSVQADGEEA AGKTSPAAEP AQKN
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