Gene Mboo_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2289 
Symbol 
ID5411946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2360309 
End bp2360917 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID640869542 
ProductRDD domain-containing protein 
Protein accessionYP_001405446 
Protein GI154151828 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGTC CAAAATGTGG GAAGGAGACT GACGCTTCCG GACAATTCTG CCAGTGGTGT 
GGAGCACCCA TCGATGCGGC TCCCCCGGCA GCCGTGGCCT CCGCAGAACC CGAGGAAACC
GCCGAGATCG GAATCTACGC CGGCCTCGGG CGCAGGTTTG TTGCATTCAT TGTCGACATC
ATCCTTATTG CCCTCTTTGG CATTATCGCG GTTGCATTCT TCAACCAGAC AAACGGGATT
ATGTATCTCT ATTATCTCGT AGTCGACCAT GCACCGATCT CCACCCTTAC CGAGTCGGGA
GCACCGATTG CAGCCCTCGG GCCCATCGCC GCTGCAGTAG GTCTCCTAGT GATCGTTGTT
CCCTGGCTTT ATTATGCCGG TTTTGAGTCG ACACGGGGAC AAGCCACCCC GGGTAAGGTT
CTCATGAGTC TCCAGGTGAC CGATCTCGAA GGCAACCGGA TCTCCTTTGG CCGTGCAACA
CTCCGGTTCT TTGCCAAGTT TATCTCGATC CTGATCATTT TTATCGGGTT TATCATGATC
GGGCTCACGA AAAAGCGCCA GGGCCTCCAC GACAAGATCG CCGGTACCCT CGTACTCCTT
CAGGACTAA
 
Protein sequence
MFCPKCGKET DASGQFCQWC GAPIDAAPPA AVASAEPEET AEIGIYAGLG RRFVAFIVDI 
ILIALFGIIA VAFFNQTNGI MYLYYLVVDH APISTLTESG APIAALGPIA AAVGLLVIVV
PWLYYAGFES TRGQATPGKV LMSLQVTDLE GNRISFGRAT LRFFAKFISI LIIFIGFIMI
GLTKKRQGLH DKIAGTLVLL QD