Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2289 |
Symbol | |
ID | 5411946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2360309 |
End bp | 2360917 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869542 |
Product | RDD domain-containing protein |
Protein accession | YP_001405446 |
Protein GI | 154151828 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTGTC CAAAATGTGG GAAGGAGACT GACGCTTCCG GACAATTCTG CCAGTGGTGT GGAGCACCCA TCGATGCGGC TCCCCCGGCA GCCGTGGCCT CCGCAGAACC CGAGGAAACC GCCGAGATCG GAATCTACGC CGGCCTCGGG CGCAGGTTTG TTGCATTCAT TGTCGACATC ATCCTTATTG CCCTCTTTGG CATTATCGCG GTTGCATTCT TCAACCAGAC AAACGGGATT ATGTATCTCT ATTATCTCGT AGTCGACCAT GCACCGATCT CCACCCTTAC CGAGTCGGGA GCACCGATTG CAGCCCTCGG GCCCATCGCC GCTGCAGTAG GTCTCCTAGT GATCGTTGTT CCCTGGCTTT ATTATGCCGG TTTTGAGTCG ACACGGGGAC AAGCCACCCC GGGTAAGGTT CTCATGAGTC TCCAGGTGAC CGATCTCGAA GGCAACCGGA TCTCCTTTGG CCGTGCAACA CTCCGGTTCT TTGCCAAGTT TATCTCGATC CTGATCATTT TTATCGGGTT TATCATGATC GGGCTCACGA AAAAGCGCCA GGGCCTCCAC GACAAGATCG CCGGTACCCT CGTACTCCTT CAGGACTAA
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Protein sequence | MFCPKCGKET DASGQFCQWC GAPIDAAPPA AVASAEPEET AEIGIYAGLG RRFVAFIVDI ILIALFGIIA VAFFNQTNGI MYLYYLVVDH APISTLTESG APIAALGPIA AAVGLLVIVV PWLYYAGFES TRGQATPGKV LMSLQVTDLE GNRISFGRAT LRFFAKFISI LIIFIGFIMI GLTKKRQGLH DKIAGTLVLL QD
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