Gene Mboo_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2276 
Symbol 
ID5410884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2346335 
End bp2346907 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID640869529 
Productrubrerythrin 
Protein accessionYP_001405433 
Protein GI154151815 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.430774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTA TCGGCAGCAA AACGGAAAAA AATGTCCTTG CGGCATTTGC CGGGGAATCC 
CAGGCCAGGA ACCGGTACAG CTATTTTGGC AAAGTGGCAA AAAACGAGGG GTACGAGCAG
ATCGCAGCGG TCTTTTTACA GACCGCCGAG GAGGAAAAAG AGCACGCGAA ACTCTTCTTC
TCGTTCCTCA AGGGAGGGAT GGTGGAGATC ACGGCCGCAT ATCCCGCCGG TGTGATCGGG
ACCACAAAAG CGAACCTGAA GGCGGCCGCT GACGGCGAGA TGATGGAATG GGGGACACTC
TACCCGACCT TTGCCGGGAC AGCAAAAGAC GAGGGATTTA TCCCGATCGC AAACATTTTT
CGGCAGGTGG CGGTGGTCGA GAAGTACCAT GAACAGAGGT ACAACCGGCT CCTTGCAAAC
CTCGAAAAAG GGATGGTCTT CAAACGCGAT ACTCCGGTGA AGTGGTACTG CCGGGAGTGC
GGGTACGTGT ACGAAGGGAC AACAGCTCCG GCAACATGCC CGGCCTGCGC CCACCCGCAG
GCATATTTCG AAATCTACGC GGAGAACTTT TAA
 
Protein sequence
MEFIGSKTEK NVLAAFAGES QARNRYSYFG KVAKNEGYEQ IAAVFLQTAE EEKEHAKLFF 
SFLKGGMVEI TAAYPAGVIG TTKANLKAAA DGEMMEWGTL YPTFAGTAKD EGFIPIANIF
RQVAVVEKYH EQRYNRLLAN LEKGMVFKRD TPVKWYCREC GYVYEGTTAP ATCPACAHPQ
AYFEIYAENF