Gene Mboo_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2270 
Symbol 
ID5411002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2339861 
End bp2340613 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content59% 
IMG OID640869522 
Producthypothetical protein 
Protein accessionYP_001405427 
Protein GI154151809 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.639645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.120252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATT ACGAGATCTT CTCAAACCTT GCCACAATCC CCCCGGTCTT TGTCCGGCTC 
GATGGCCGGG CGTTCCACGG CCTGACCAAA AAGTACGGGT TTGCAAAACC GTTCGACGAC
AGGTTCTGCT CGGCAATGAT GGCTGCGTGC CGGGCCCTTG TTGCCGACAG CGGTCTTGCG
CCGGTGTTTG CGTACACGTT TTCGGACGAG ATCAGTCTGT ACTTCACCGG GCTGCCCTTC
TCAGGAAGGG TGGAGAAGAT CGATTCGGTG GCTGCCTCGT ATGCGGCAAG CGCCCTGACA
CTCGCCCTTG GGGCAGAGGA GCCACTAGCT TTCGATGCCC GGGTTGTGCA GGCAACCCCG
GAGACCGCGA TTGAGTACAT GACCGGCCGA CAGGACGAGG CCTGGCGCAA CCACATCAAC
TCCTACTGCC AGCAGGCGCT GATTGCCGAA GGGATGGATG CCACCGATGC GGCACGAAAA
CTTAAAGGGC TGCCGGCGGC AGAGCTTCAC GAGATGATGC ACGAGCGGGG AGTTAACCTG
GCAAAGACGC CGGCCTGGCA GCGCCGGGGG ATTCTTGTCT GCAAAAAAGA GGAAGAAAAA
GAAGGGTACA ACCCGGTTAC GGATGAACAC GTGATCGTAA CCCGGAGCAG GGTTGTTGAA
GACCGCGACC TCCCGCTCTT TTCAACGCCG GAAGGGCAGG CATTTCTGCG GATGCTGATC
TGCGGAAAAC CGGAAACATC CGGGAGCTCA TAA
 
Protein sequence
MDNYEIFSNL ATIPPVFVRL DGRAFHGLTK KYGFAKPFDD RFCSAMMAAC RALVADSGLA 
PVFAYTFSDE ISLYFTGLPF SGRVEKIDSV AASYAASALT LALGAEEPLA FDARVVQATP
ETAIEYMTGR QDEAWRNHIN SYCQQALIAE GMDATDAARK LKGLPAAELH EMMHERGVNL
AKTPAWQRRG ILVCKKEEEK EGYNPVTDEH VIVTRSRVVE DRDLPLFSTP EGQAFLRMLI
CGKPETSGSS