Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2270 |
Symbol | |
ID | 5411002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2339861 |
End bp | 2340613 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640869522 |
Product | hypothetical protein |
Protein accession | YP_001405427 |
Protein GI | 154151809 |
COG category | [S] Function unknown |
COG ID | [COG4021] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.639645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.120252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATT ACGAGATCTT CTCAAACCTT GCCACAATCC CCCCGGTCTT TGTCCGGCTC GATGGCCGGG CGTTCCACGG CCTGACCAAA AAGTACGGGT TTGCAAAACC GTTCGACGAC AGGTTCTGCT CGGCAATGAT GGCTGCGTGC CGGGCCCTTG TTGCCGACAG CGGTCTTGCG CCGGTGTTTG CGTACACGTT TTCGGACGAG ATCAGTCTGT ACTTCACCGG GCTGCCCTTC TCAGGAAGGG TGGAGAAGAT CGATTCGGTG GCTGCCTCGT ATGCGGCAAG CGCCCTGACA CTCGCCCTTG GGGCAGAGGA GCCACTAGCT TTCGATGCCC GGGTTGTGCA GGCAACCCCG GAGACCGCGA TTGAGTACAT GACCGGCCGA CAGGACGAGG CCTGGCGCAA CCACATCAAC TCCTACTGCC AGCAGGCGCT GATTGCCGAA GGGATGGATG CCACCGATGC GGCACGAAAA CTTAAAGGGC TGCCGGCGGC AGAGCTTCAC GAGATGATGC ACGAGCGGGG AGTTAACCTG GCAAAGACGC CGGCCTGGCA GCGCCGGGGG ATTCTTGTCT GCAAAAAAGA GGAAGAAAAA GAAGGGTACA ACCCGGTTAC GGATGAACAC GTGATCGTAA CCCGGAGCAG GGTTGTTGAA GACCGCGACC TCCCGCTCTT TTCAACGCCG GAAGGGCAGG CATTTCTGCG GATGCTGATC TGCGGAAAAC CGGAAACATC CGGGAGCTCA TAA
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Protein sequence | MDNYEIFSNL ATIPPVFVRL DGRAFHGLTK KYGFAKPFDD RFCSAMMAAC RALVADSGLA PVFAYTFSDE ISLYFTGLPF SGRVEKIDSV AASYAASALT LALGAEEPLA FDARVVQATP ETAIEYMTGR QDEAWRNHIN SYCQQALIAE GMDATDAARK LKGLPAAELH EMMHERGVNL AKTPAWQRRG ILVCKKEEEK EGYNPVTDEH VIVTRSRVVE DRDLPLFSTP EGQAFLRMLI CGKPETSGSS
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