Gene Mboo_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2226 
Symbol 
ID5410883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2297211 
End bp2297777 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content58% 
IMG OID640869478 
Productisochorismatase hydrolase 
Protein accessionYP_001405383 
Protein GI154151765 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTC CCGCACTGCT GATCATCGAT ATGCAGAACG ATTTTGTCCG GGAAGGGGCG 
CCGCTCCGGG TAGCCCAGGC AAAGAGCGTC ATCCCGAAGA TCCTGGAGGT GCTCGAAGCA
TTCCGGGCAA AGAACCTCCC AGTCTTCCAT ATCCTGCGAA TCCACCGTAG CGACGGGTCC
GATGTTGAGA TCACGAGAAT TGAGATCTTT TCCCGGCACC CGTTTGCCGT TGCAGGATCG
GAGGGTGCCC GGGAGATCAC GGAGCTTACA CCCCGGCCGG GCGAGCACGT GATCGGGAAA
GTGAGGATGA GCGCGTTTAT CGGTACCGAA CTCGGCCTCA TGCTCCAGAC GCTTGGTGTC
ACGGAACTGG TCGTGACCGG GATCCAGACT CCCAACTGCA TCCGAACCAC GGTCTTTGAC
GCCATAGCGT ACAACTACCC GGTGATACTT GTGGACGATG CCACCGGCGC CCAGTCGGAG
GATATCCACC GGGCAAACGT CCTGGATATG AAAAACATTG GTGTCCGGAT CATGGACACC
CGGACCCTTA TTGACACGCT GGGGTAA
 
Protein sequence
MERPALLIID MQNDFVREGA PLRVAQAKSV IPKILEVLEA FRAKNLPVFH ILRIHRSDGS 
DVEITRIEIF SRHPFAVAGS EGAREITELT PRPGEHVIGK VRMSAFIGTE LGLMLQTLGV
TELVVTGIQT PNCIRTTVFD AIAYNYPVIL VDDATGAQSE DIHRANVLDM KNIGVRIMDT
RTLIDTLG