Gene Mboo_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2145 
Symbol 
ID5409963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2216005 
End bp2216715 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content55% 
IMG OID640869390 
Productglycosyl transferase family protein 
Protein accessionYP_001405302 
Protein GI154151684 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCC CCGCCACCGA ATTCAGATAC AGTCTGGTTA TCCCGGCATA CAACGAGGAA 
AAACGGATTG CCTGCATCTT TGAGAACCTC CGGTGCTTCG ATGGAGAGAT CATCGTTGTC
TGCGATGGAA GCGACCACAC TGCAGATATC ATAGAGACTA TCGCCAGAGA TCAGCCAGCA
CTCGGTATCC GCTGCCTGCG TTTCTCAAAC CGCCTGGGGA AAGGCGGAGG GGTGATCGCG
GGGCTTGCAA CAGCACGGGC TCCCCTTGTA GGGTATGTTG ATGCGGATGG TTCCACCAGC
ATTGAGGAGA TGATCAGGCT TTTTGGCCAT CTTGCATCTT ATGACGTGGT TATCGGTTCG
CGGTGGGTAC CCGGTTCGGC TCCTTCAGTA CGGCAGGGAT GGGTCCGCCG GCTGGAAAGC
CGGGGATTCA ACACAATTAT ACGGCTCCTG TTTGGTCTTA CCTTCCACGA TACCCAGTGC
GGGGCAAAAG TCTTTAAAAA AAACGCGGTC GATGCTGTAT TACCTCATCT TATCGCACAG
GGTTTTGAGT TCGATGTAGA ATTGATCTGG AGGCTGGAAC AGGCCGGTTG CCGGATTGAG
GAGGTTCCAA TCGTATGGCA GAACAAGGGG GATTCCCGGG TCAGGAAAGG AGATATGCTG
CGGATGCTTG CCGGTCTCCT CCGGGTCCGG TTCCGCCCGG CCAGGCCATG A
 
Protein sequence
MSSPATEFRY SLVIPAYNEE KRIACIFENL RCFDGEIIVV CDGSDHTADI IETIARDQPA 
LGIRCLRFSN RLGKGGGVIA GLATARAPLV GYVDADGSTS IEEMIRLFGH LASYDVVIGS
RWVPGSAPSV RQGWVRRLES RGFNTIIRLL FGLTFHDTQC GAKVFKKNAV DAVLPHLIAQ
GFEFDVELIW RLEQAGCRIE EVPIVWQNKG DSRVRKGDML RMLAGLLRVR FRPARP