Gene Mboo_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2127 
Symbol 
ID5410214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2199311 
End bp2200087 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content55% 
IMG OID640869372 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001405284 
Protein GI154151666 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCGG CCCGCGAGCG CGAACGGTAT AAACGCCAGC TGATACTCTT TGGCGATGAA 
GGCCAGGAAC GGCTCAAAAA AGCCCATATC TTCATTGCCG GGGCCGGAGG ACTGGGCTCG
CCGGTCTCCA TCTATCTTGC GGTGGCAGGG GTCGGGACCC TCACCGTGGT GGACAAGGAT
GTGGTCGACC AGACCAACCT CAACCGCCAG ATCCTGCACT ATGACAAGGA TATAGGAAAA
AAGAAGACGG AATCCGCTGA AGAGAAGCTC ATAGCCTGGA ACCCGGATAT CACCATCCGC
GTGATCGATA CCACCATCGA TGCGGGGAAT GTAGGGAAGC TGATCGGGCG TGCCGATGGG
ATTGTCGATG CGATGGACAA CTACCCGACA CGGTATCTCC TCAACGATAC TGCTCACACA
AAAAAGATCC CGTTCTTCCA TGGAGCAATC CGGGGATTCT ATGGCCAGGC CACAACGATT
ATTCCCGAAA AAACTGCCTG CCTGCGCTGT ATCTTTCCCT GTGCCCCGCC CCAGGAAGTG
TTTCCTGTTG TGGGAGTAAC ACCGGGCGTG ATCGGTACCA TCCAGGCAAC CGAGGTCCTC
AAGTATCTCC TTGGAACCGG GGACCTGCTG GCAAACCGCC TGTTGATCTG GGACGGGATG
GCCATGCATA CAGAGGAGAT CAGGGTTGAA CAAAACCCGG CCTGCCCCAC CTGTGGAGCG
AAGGTCAATC CACCTGAAAC GAAAAGATCA CAAAAGAGGG AAAAAAATGA CAATTAA
 
Protein sequence
MLSARERERY KRQLILFGDE GQERLKKAHI FIAGAGGLGS PVSIYLAVAG VGTLTVVDKD 
VVDQTNLNRQ ILHYDKDIGK KKTESAEEKL IAWNPDITIR VIDTTIDAGN VGKLIGRADG
IVDAMDNYPT RYLLNDTAHT KKIPFFHGAI RGFYGQATTI IPEKTACLRC IFPCAPPQEV
FPVVGVTPGV IGTIQATEVL KYLLGTGDLL ANRLLIWDGM AMHTEEIRVE QNPACPTCGA
KVNPPETKRS QKREKNDN