Gene Mboo_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2126 
Symbol 
ID5410213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2198833 
End bp2199267 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content53% 
IMG OID640869371 
ProductNifU domain-containing protein 
Protein accessionYP_001405283 
Protein GI154151665 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU
[TIGR03419] FeS cluster assembly scaffold protein NifU, Clostridium type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGCG AAACCGTAAT GGATCATTTC AAGAATCCGC GCAATGTCGG AGAGATTGAG 
AATCCCGATG GTGTCGGGGA GGTCGGGAAC CCGGTCTGCG GCGACATCAT GAAGATCTTC
TTAAAGATCG AGAACAACAT CGTTGTCGAC GCGAAGTTCA AGACCTTTGG CTGCGGGGCG
GCAATTGCAT CGAGCAGCAT GGCAACAGAG CTTGTCCGGG GAAAAACTCT TGAGGAGGCA
TGGCAGCTCT CCAACAAGGC CGTTGCCGAG GCGCTTAACG GCCTGCCACC GATCAAGATG
CACTGTTCGG TGCTCGCGGA GGAGGGCATT CATAAAGCAA TCAACGATTA TCGTGTCAAA
CATGGTCTCG AACCCTGGCA GGAAACCTCT TCTCATGCCC ATGAGCATGA GGAAGGAATC
GAGTGCCAGC ACTAG
 
Protein sequence
MYSETVMDHF KNPRNVGEIE NPDGVGEVGN PVCGDIMKIF LKIENNIVVD AKFKTFGCGA 
AIASSSMATE LVRGKTLEEA WQLSNKAVAE ALNGLPPIKM HCSVLAEEGI HKAINDYRVK
HGLEPWQETS SHAHEHEEGI ECQH