Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2126 |
Symbol | |
ID | 5410213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2198833 |
End bp | 2199267 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640869371 |
Product | NifU domain-containing protein |
Protein accession | YP_001405283 |
Protein GI | 154151665 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU [TIGR03419] FeS cluster assembly scaffold protein NifU, Clostridium type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAGCG AAACCGTAAT GGATCATTTC AAGAATCCGC GCAATGTCGG AGAGATTGAG AATCCCGATG GTGTCGGGGA GGTCGGGAAC CCGGTCTGCG GCGACATCAT GAAGATCTTC TTAAAGATCG AGAACAACAT CGTTGTCGAC GCGAAGTTCA AGACCTTTGG CTGCGGGGCG GCAATTGCAT CGAGCAGCAT GGCAACAGAG CTTGTCCGGG GAAAAACTCT TGAGGAGGCA TGGCAGCTCT CCAACAAGGC CGTTGCCGAG GCGCTTAACG GCCTGCCACC GATCAAGATG CACTGTTCGG TGCTCGCGGA GGAGGGCATT CATAAAGCAA TCAACGATTA TCGTGTCAAA CATGGTCTCG AACCCTGGCA GGAAACCTCT TCTCATGCCC ATGAGCATGA GGAAGGAATC GAGTGCCAGC ACTAG
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Protein sequence | MYSETVMDHF KNPRNVGEIE NPDGVGEVGN PVCGDIMKIF LKIENNIVVD AKFKTFGCGA AIASSSMATE LVRGKTLEEA WQLSNKAVAE ALNGLPPIKM HCSVLAEEGI HKAINDYRVK HGLEPWQETS SHAHEHEEGI ECQH
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