Gene Mboo_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2000 
Symbol 
ID5410424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2068692 
End bp2069180 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content55% 
IMG OID640869242 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001405157 
Protein GI154151539 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.744439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCA GACGACTGCA AAAAGAAGAT CTTCCTGCCC TGGCCCGGCT GTACATGCAG 
TTCTGGAACG AGGAGTCTTC CCTTGTGCGG ATGCAGGAAA CCTTTGCGCG GCTCAGGAAT
GATCCGGATT ACGTTTTTCT TGTCGCTGAG GTGGACGATG AGATAGCCGG GTCTCTCATG
GGGATCATCT GCGAAGAGCT TTATGGTGAA TGCCGCCCGT TTTTGGTCAT TGAGGACGTG
ATCGTTGACC GCGAATTCCG TCAGCAGGGG ATAGGTTCTG CACTGATACG CGAGATCGAG
TCATACGCGG TCTCGCGCAA CTGCAATTAC ATCATTTTTG TATCTGAGCT TGAGCGGACC
GATGCAGTCC CGTTCTACCG CTCGCTCGGG TACGCCCCCG ATTCGTACCG GGGCTTCAAA
AAACGGCTGG GCGCACAGGG TAAACGATCA CTGCCTCCGC CCCTCACCGA TACCAGGAAC
CCGGAATAA
 
Protein sequence
MIIRRLQKED LPALARLYMQ FWNEESSLVR MQETFARLRN DPDYVFLVAE VDDEIAGSLM 
GIICEELYGE CRPFLVIEDV IVDREFRQQG IGSALIREIE SYAVSRNCNY IIFVSELERT
DAVPFYRSLG YAPDSYRGFK KRLGAQGKRS LPPPLTDTRN PE