| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1984 |
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| Symbol | |
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| ID | 5410238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2048854 |
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| End bp | 2050038 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640869225 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_001405141 |
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| Protein GI | 154151523 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.278859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.836735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCCCG ATACAATCCG TAAGGATTTT CCGCTGCTTT CCTCGGTCTG CTACCTGGAC
AGCGCCGCAA CCAGCCTTTC ACCGGAGCCG GTCCTTAACG CAATGCTCGA GTACGAGCAT
ACCTGCCGGG CAAATGCCGG CCGCGGCGTC CACAGGCTCG CCCAACAAGC CACCCAGAAA
TACAAGGAGG CCCATGAACG GGTCAAAAAA TTTATTCATG CCGAAGAGGG GGAAGTCGTT
TTTACCCGCA ACTCCACCGA GGCGATAAAC ACGGTCGCAT CGGGCCTTTC CTGGCATGAG
GGGGAGGGTA TCATTTCCAC CCTCCTTGAA CATCATAGTA ATCTTCTTCC CTGGATGCGC
CTGCGTGACC ACCAGGGGCT CGACCTCCGT TTTTTGACAC CGGCACAGGA CGGAGCCTTG
GATCCGGCTG CCCTGGAGGC GATCATTACC AAAAAGACGC GCCTTGTGGC CATCACCGAG
ACCTCCAACG TTCTTGGGAA CGTCGTTCCG GTCAGTGAGT TTGCAAAAAT CTGTCATGAT
TATGGGGCGC TCCTTCTGGT GGACGGATCC CAGTCTGTTC CCCACATCCC GGTAGATATC
GGGAAGAGCG GTTGTGATTT TTTCTGTTTT TCCGGACACA AGATGCTTGG ACCTACCGGC
ACCGGTGTCC TGTTCATGAA AGAGCCCTGC CTGGAGCCCC TCGTTGTTGG GGGAGGAAGC
GTGGAACGGG TTACAGCCGC AGGGTATACA CTTACCGGGG GATATGAGCG GTACGAATCC
GGTACACCCA ATATCGCAGG TGCGATCGGT CTTGGCCGTG CCATCGAATA CCTCAACTCT
CTGGGCATGG AAAATATTCA ACGCCATGAG CAGGCAATCA CCCGGAGAAT TATCGAGGGT
CTGACCGGGA TCGGGAACCT CCATATCTTT GGTCCCGGCC CATCAGGAAA CCGGATAGGG
GTTGTCTCGT TTACCCTGGA CGGCTTTAAT CCCCATGATG TTGCCATCCT TCTGGACAGT
GAAGCAGATA TTATGGTACG GTCCGGCCAC CACTGCTGTA TGCCACTCAT GGATTGCCTG
CACCTTTCCG AGGGTACGAT CCGTGCAAGC CTGCATTGCT ATAACACGAT GGAGGATGCA
GATCGGCTCG TAGAAACTGT CGGAAAAATT GCCGGGGAAC GGTGA
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| Protein sequence | MIPDTIRKDF PLLSSVCYLD SAATSLSPEP VLNAMLEYEH TCRANAGRGV HRLAQQATQK
YKEAHERVKK FIHAEEGEVV FTRNSTEAIN TVASGLSWHE GEGIISTLLE HHSNLLPWMR
LRDHQGLDLR FLTPAQDGAL DPAALEAIIT KKTRLVAITE TSNVLGNVVP VSEFAKICHD
YGALLLVDGS QSVPHIPVDI GKSGCDFFCF SGHKMLGPTG TGVLFMKEPC LEPLVVGGGS
VERVTAAGYT LTGGYERYES GTPNIAGAIG LGRAIEYLNS LGMENIQRHE QAITRRIIEG
LTGIGNLHIF GPGPSGNRIG VVSFTLDGFN PHDVAILLDS EADIMVRSGH HCCMPLMDCL
HLSEGTIRAS LHCYNTMEDA DRLVETVGKI AGER
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