Gene Mboo_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1970 
Symbol 
ID5410793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2033008 
End bp2035131 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content52% 
IMG OID640869210 
Productprotein kinase 
Protein accessionYP_001405127 
Protein GI154151509 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.664592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGA AAAGAATTGA CCCCATTAAG ACCTGCATCC CGGCATGGAT CCTTATTATC 
AGCGCAGCGG TATTGCTTAT TATCGCATCT TTTGTCCCTC CAGCTGCAGG AGCGGAATAC
GTGGTTGCAC CATCCGGAGG CAGCTTTACC AGTATCCAGA ATGCAGTGAC ATGGGCGTCG
CCTCTCGATA CCATTGTGGT GAAGAGCGGG ACCTACCCGG GGACAGTCAA AATCGATAAA
AGGATCACGC TGATTGGGAT GGATACCGGT GGAGGAGCGC CGGTTATAGA TCCCGGAAGG
AAAGGAACCG CTGTTGAGAT CGATGCTGAC AATTGTTCCG TTCAGGGTTT TGTTATCCGG
AACAGTGCGG AGGCGAGCGG GATTCTAGTT GCCTCGAACG GGAATACGAT CTCCAACAAC
ACTCTTACCG GTAATGCAGT AGGGATCCAG CTCTCTTCTA CAAATAGCAA CTGGGTGACC
GGAAATACGA TAACTGCCAA CAGCCGGGCG GGCATTGTGC TCAAGGATGC CCAGGGTAAC
CTGATCTATG GGAACCGGCT GACAAACAAT GCTATCGGGA TATCCATTGA TGAGCTCTCC
GGTGCTAACA CGATCTACCT TAACTCCTTT TCCAATACGG TAAATGTTGT GTCCCGGGGC
AGCGGCCAGC AGTGGGAATC GCCGTCAAGT CTGACCTATA CGTATATGGG ACGATCGTTT
ACCCGGCAAC TGGGAAATTA CTGGAGTGAT TACCGGGGGA CCGGAGATCA GAACTCTGAT
GGGGTAGGTG ATGCATCGTA TATCATACGT TCTGAATCTG CCCGGATTTC TGGAAATGCC
GGCTCTGGCA ACGAAATCGA TCCGGCTCCC CTCATGGATC CTATTGATTA TTATCTGCAG
ATCAGTTCGG CGGCATCCGG GACAGGGACG ATTACCCCGC CATCATCCCC CTCAGTAACT
GCACCTGCCA CCGGACAAGT ATCAATTCCC GAGGAGAGTA CTTCTCTGCC TGGGAGCCAC
CCCGGCAGGG ATCTCGTAAC TCTGGTCATA ATTATAATCC TGATCGGTAT TGTTGGAGTT
GGGGGGATGC TCTTCATCCG GTCCCGTTCA CAGCATAAAG GTCAGGTACT CTCTGCCCCG
GTAAATATCG ACGATACTCC GTCTCGTCAG GTTCACGCAT CACACCACGT TGACGAATCC
TTAGTATATA GTAAGCCCCC TCTCGACACC GGCCCTATGG AGACCGTTCC TGCCCTTGAG
ACCGAAGTGA TCACTGCCTC TCGGGAATCA GCTCTGCCCT CAGCAGGATC GAAGTTTTAC
TTCCCGCCGG AACTTGAGAG CAGGTATAGT GACATCCGGC ATATCGGCCG GGGGGGCGTG
GCGCAGGTCT TTGCCGCGCA TCGAAAATCC GATAACCTTC TCGTAGCAGT CAAGATACCG
ATCAGCTTTG ATGAAGTGAC CGGTAAATGT TTCCTTAACG AGATTGCTGC ATGGCAGACA
CTCCGTCACA AAAATATTGT CGAAGTGCTG GAGGTTAACA TCCTCCCGGT TCCCTATGTG
GAAATGGAAT ATGTGCCCGG TTCCCTGGAG TCCGTGGAAA AACCCCTTCC GGTCTGGAAG
GCGGTTCATC TGGTGCACGG GATAGCAGAC GGTCTGGCAT ACGCCCATAC CCACGGAATC
ATTCATCGTG ACATCAAGCC GCACAACATC CTTGTAACCA GCGATTTTGT TCCCAAGATC
ACTGACTGGG GCATGAGTAA AGTCATCGCA ACTACCATGG ACAAATCCAA TGTTGCCGGT
TTCTCTCTTT CGTACGCTGC ACCTGAACAG GTCTCCCCGG CCGAGTTTGG CAGAACTGAT
ATCCGTACCG ATATATACCA ACTGGGGGCG CTCTTTTACG AGCTGGTCAC GGGGTCCATC
CCCTTTGGCG GGGACAGCAT TGTTGAAGTT GGAAACGCTA TTGTTCGGGA TGATCCCCTC
CCTCCCACCG AGTACAATCC CGATGCGGAA GTCGTGGAAA AAATTATCCT TAAATGTCTT
GCAAAAAATC CTGCGGACCG GTACCAGTCC GCTGACGAAT TGCTTAATGC TCTTTCCCGT
TATCTTGATG AGGACGATGA ATAA
 
Protein sequence
MIQKRIDPIK TCIPAWILII SAAVLLIIAS FVPPAAGAEY VVAPSGGSFT SIQNAVTWAS 
PLDTIVVKSG TYPGTVKIDK RITLIGMDTG GGAPVIDPGR KGTAVEIDAD NCSVQGFVIR
NSAEASGILV ASNGNTISNN TLTGNAVGIQ LSSTNSNWVT GNTITANSRA GIVLKDAQGN
LIYGNRLTNN AIGISIDELS GANTIYLNSF SNTVNVVSRG SGQQWESPSS LTYTYMGRSF
TRQLGNYWSD YRGTGDQNSD GVGDASYIIR SESARISGNA GSGNEIDPAP LMDPIDYYLQ
ISSAASGTGT ITPPSSPSVT APATGQVSIP EESTSLPGSH PGRDLVTLVI IIILIGIVGV
GGMLFIRSRS QHKGQVLSAP VNIDDTPSRQ VHASHHVDES LVYSKPPLDT GPMETVPALE
TEVITASRES ALPSAGSKFY FPPELESRYS DIRHIGRGGV AQVFAAHRKS DNLLVAVKIP
ISFDEVTGKC FLNEIAAWQT LRHKNIVEVL EVNILPVPYV EMEYVPGSLE SVEKPLPVWK
AVHLVHGIAD GLAYAHTHGI IHRDIKPHNI LVTSDFVPKI TDWGMSKVIA TTMDKSNVAG
FSLSYAAPEQ VSPAEFGRTD IRTDIYQLGA LFYELVTGSI PFGGDSIVEV GNAIVRDDPL
PPTEYNPDAE VVEKIILKCL AKNPADRYQS ADELLNALSR YLDEDDE