Gene Mboo_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1958 
Symbol 
ID5409995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2022370 
End bp2023182 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content61% 
IMG OID640869199 
ProductADP-ribosylation/crystallin J1 
Protein accessionYP_001405116 
Protein GI154151498 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.667193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.919157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCCG GCGGGCGCCA TTTCCGGAGG GCCGGTCAGT ACACGGACGA CACCCTCCAG 
GCACTTGCGG TCGCGGAATC GCTTATTGCA TGCGAGAGAT TCGACCCGTC AGACCTCGTA
CAACGTTTTC TTTCCGGATA CCGCAAACGG CCGGAATGGT ACGGCCCTAC CTCATCTGCT
TTTTTCGATC TGGTTGGTTC CGGTACCCCG CCTCACCATG CCGCGTGGCT GGTCCACCGT
CGCAATGGGG GGAGCCGGAC AAACGGGAGC GTTATGAGAG GTTTTCCGCT TGGGATCTTT
TACCCGGCTG ACCATGCATA TACCATCAGC ATAGACTGCT CCCGGATCAC GCACTACGAC
ACGGTGGCCG CTCACTGCTC CGCATGGATG ACCATGATGG CAGCAGACCT GTGCCGGGGC
GCGACCCGGA GACGGGCTTT TATGCATGCA CGCTCGCGGT GCCTGAATGC GGAAGTGCTT
GCGGTCCTAG GCAGTTTCGA GCGGTACCCC CGTATCCCCT CTCTGGACGC CGTACAGTGT
GCACACGCGG CGCTTTCGTG TTTCATGAAC GCCAGGACAT TTGAAAACGC ACTCCTTGCC
GCAGTCAATC TTGGCGGAGA CGCGGATACC GTGGGGGCCT GCTGCGGGGC GCTTGCCGGG
GCATACTGGG GTATGAACGC CGTACCGGAG CGGTGGAGCC GGATGATTGA GGGGTACGAC
GAGCTGATCC GTATTGCAGG GGCGTTGTGG GAGAGTCGGG AAGACCGGAA AGAACAGAGG
TGGCGTGCGG ATAACCGCGA GTTCTTACCA TAA
 
Protein sequence
MRPGGRHFRR AGQYTDDTLQ ALAVAESLIA CERFDPSDLV QRFLSGYRKR PEWYGPTSSA 
FFDLVGSGTP PHHAAWLVHR RNGGSRTNGS VMRGFPLGIF YPADHAYTIS IDCSRITHYD
TVAAHCSAWM TMMAADLCRG ATRRRAFMHA RSRCLNAEVL AVLGSFERYP RIPSLDAVQC
AHAALSCFMN ARTFENALLA AVNLGGDADT VGACCGALAG AYWGMNAVPE RWSRMIEGYD
ELIRIAGALW ESREDRKEQR WRADNREFLP