Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1955 |
Symbol | |
ID | 5409992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2019213 |
End bp | 2020337 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640869196 |
Product | putative DNA primase, small subunit |
Protein accession | YP_001405113 |
Protein GI | 154151495 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit |
TIGRFAM ID | [TIGR00335] DNA primase, eukaryotic-type, small subunit, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.804448 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGG CGACAACGGA GTTTGTGCGG CAGCGTTTTG CGGAGTACTA TCGCAAGGCC ATGCTAGTTT CGCCCTCATC TCTTGCCCAG CGTGAATGGG GTTTTGTCCT TTTTAACCCG GGGGCCGCCG AGCTGCGGAT GCGCCGACAT ATCGCATTCC CTGAACGTAC GGAGCTTTTT GATTACATCA GGAACCTTGT CCCCTCTCAT GTGTATTACT CGAGCGCGTA CTATGAGAAA CCGGATGCGC CTACCATGGC CGAGAAAGGC TGGTGTGGGG CCGACCTGAT CTTCGATCTC GATGCGGATC ATATTGTCAA GGGGCCCTAC GACCAGATGC TCTCCCGGGT CAAAACCGAA ACCGAGAAAC TGCTTGCCAT GCTCACTGAA GAGCTGGGGA TCGATTCAAA ACAGATTGAG CTGGTCTTTT CCGGTGGGAG GGGCTACCAC GTGCACGTGC GGGATCTTGC CTTCCGCGGG TGGGGGAGTG CTGAGCGGCG GGAACTGGTT GACTACATCT GCGGTATCGG GATAGATCCC GCCGTGCTGC TGAACGGGGG CCTGGTGCCC GGGTGGCCAG CCCGGTTCCG CAGCGCGCTG GCGGAATATA TCGGATGGCT CGGAACGCTC AGCGAAGATG GGGCGATGGC ACATCTGACT TCGCTTGAAG GCGTGGGAAA AGAATCAGCA GCCGGGTTTT TGAAAAAACG TGCAGAGATC CTTGCCGGGC TCAGCGGGGA AATCGATCCC ACTCTTCTCA AAGACCGGGT AATAAAAGCA GTTGTGCACG AAACTGAAGG GGAGTTTCGG AAACGGCTCA ACGAGAAAGC CGCGCTTGCA GATGAACCGG TCACAACGGA CATCAAGCGC CTGATCCGGA TGCCAACATC CATCCATGGC GGCAGCGGGA TGCGGGTCCA GCCACTTGAA CTACGGGATC TGCCTGACTT TGATCCCCTT GTGGATGCAG TGGTCTTTTC TGCCCGCGAG GTCCGCGTGG ACGCTCGCTT CCCGCTTGCC ATGCCTATGC TGGGAAGCAC TTATCAGATC CAAAAAGGGA TCTCTACAGT ACCCGAAGCC GTGGGCGTCT TCCTCTGCTG CCGCGGCATT GCGGAAATTG CATAA
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Protein sequence | MNPATTEFVR QRFAEYYRKA MLVSPSSLAQ REWGFVLFNP GAAELRMRRH IAFPERTELF DYIRNLVPSH VYYSSAYYEK PDAPTMAEKG WCGADLIFDL DADHIVKGPY DQMLSRVKTE TEKLLAMLTE ELGIDSKQIE LVFSGGRGYH VHVRDLAFRG WGSAERRELV DYICGIGIDP AVLLNGGLVP GWPARFRSAL AEYIGWLGTL SEDGAMAHLT SLEGVGKESA AGFLKKRAEI LAGLSGEIDP TLLKDRVIKA VVHETEGEFR KRLNEKAALA DEPVTTDIKR LIRMPTSIHG GSGMRVQPLE LRDLPDFDPL VDAVVFSARE VRVDARFPLA MPMLGSTYQI QKGISTVPEA VGVFLCCRGI AEIA
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