Gene Mboo_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1951 
Symbol 
ID5412106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2016962 
End bp2017753 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content52% 
IMG OID640869192 
Producttranslation initiation factor IF-2 subunit alpha 
Protein accessionYP_001405109 
Protein GI154151491 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1093] Translation initiation factor 2, alpha subunit (eIF-2alpha) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.612676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACA GGGAGTGGCC TCAGGAAGCG GAACTGGTTG TTTGTACCGT AGAAAATGTC 
AAGGATTTCG TAGCGTTCGT ATCGCTTGAC GAGTACAACG GCAGGCAGGG TCTCATCCCG
ATATCTGAAA TCGCAACCGG CTGGATAAAA TATATCCGTG ACCACATCCG TGAGGGCCAG
AAAATCGTCT GCAAGGTTCT CAACGTTGAC CGGACCCGTG GCCACATTGA CCTTTCTTTA
AAAGACGTCA ACGACCACCA AAGGCGCGAG AAGATTCGCG AGTGGAAGAA CGAGTCCAAG
GCACGCAAGT GGATTGGATT TGTTGCGGAA AAATCCGGGG AACCTGCCAC AGCGATAGAG
GATGTTATCC TCGATAAATA CGGGGAACTC TATGCGGTTT TTGAAGATGT AGTCCTTGAC
AGCGACGCAA CGATCAGGAA GCTGGGCCTC TCCAAAAAGG CAAGTGAAGC CCTGATTCAT
ATCGCCCACG AGAGTGTCAA AATCCCAAGA GTCGAAGTGA CCGGCCAGCT TGTTCTGACG
TCTGCTGAAT CTGACGGCGT GATGGTTATC CGGAATGCCT TAAAAAAGGC AAGCGACGCA
AAGACGGCGG GAGCCGATAT CGAACTGCTG TACCTGGGTG CGCCGATCTA CCGGATCAAG
GTTACCGCTG CCGATTACAA GAAAGCGGAA AAAGCGCTTG AAAAGGCAGC AAACGCTGCC
ATTGCCGTTG TTGAGAAGAG CGGCGGCGAG GGCAAGCTGG TCAAGAAGCC CAAGTCCGGG
AAAAGCCAAT GA
 
Protein sequence
MPDREWPQEA ELVVCTVENV KDFVAFVSLD EYNGRQGLIP ISEIATGWIK YIRDHIREGQ 
KIVCKVLNVD RTRGHIDLSL KDVNDHQRRE KIREWKNESK ARKWIGFVAE KSGEPATAIE
DVILDKYGEL YAVFEDVVLD SDATIRKLGL SKKASEALIH IAHESVKIPR VEVTGQLVLT
SAESDGVMVI RNALKKASDA KTAGADIELL YLGAPIYRIK VTAADYKKAE KALEKAANAA
IAVVEKSGGE GKLVKKPKSG KSQ