Gene Mboo_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1919 
Symbol 
ID5410117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1982641 
End bp1983402 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content56% 
IMG OID640869157 
Productphosphate ABC transporter ATP-binding protein 
Protein accessionYP_001405077 
Protein GI154151459 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.603751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CAACTGTTAT TGCAACCAAA AACCTCAACC TCTGGTATAA CGAGAAACAC 
GCTCTCCAGG ATATCACCAT GGATATTGAA AAGAAGAAGA CCACCGCGCT GATCGGACCC
TCCGGGTGCG GGAAGTCCAC GCTGCTCCGG TGCTTTAACC GGATGAACGA TCTCATCAGC
CACGTGAAGA TCACCGGGCA ACTCCTCCTC GATGAAGAGG ATATGCTCTG CAACGGCATG
GACGTAGTGG CCTTACGGAA ACGGGTCGGC ATGGTCTTCC AGCGCCCCAA CCCCTTCCCC
AAGTCCATCT ACGAGAACGT TGCCTACGGC CCCCGGGTCC ACGGGATCAA CGACCGTAAG
GAGCTGGACA CAATCGTGGA AAAGAGCCTC AGGCACGCCG CGCTCTGGGA CGAGGTTCGG
GACCGGCTTA ACGATTCCGC TCTCGGACTC TCAGGAGGCC AGCAGCAACG GCTCTGCATC
GCCCGGACCC TTGCCGTAGA GCCTGAAGTA ATCCTGATGG ACGAGCCCTG CTCTGCGCTT
GACCCGATCG CGACAGCGAA GATCGAGAAC CTCATCGAAA TGCTCAAAGA ATATTATACG
GTCATCATTG TCACGCACAA CATGCAGCAG GCGGCCCGGG TCAGCGATTA TACTGGTTTT
ATGTACCTGG GCAAGCTCAT CGAATTTGAC AAGACCACCA CCATCTTCGA GCACCCCAAT
GAGGACCTGA CCGAGAACTA TATCACCGGC CGGTTCGGGT GA
 
Protein sequence
MSDSTVIATK NLNLWYNEKH ALQDITMDIE KKKTTALIGP SGCGKSTLLR CFNRMNDLIS 
HVKITGQLLL DEEDMLCNGM DVVALRKRVG MVFQRPNPFP KSIYENVAYG PRVHGINDRK
ELDTIVEKSL RHAALWDEVR DRLNDSALGL SGGQQQRLCI ARTLAVEPEV ILMDEPCSAL
DPIATAKIEN LIEMLKEYYT VIIVTHNMQQ AARVSDYTGF MYLGKLIEFD KTTTIFEHPN
EDLTENYITG RFG