Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1899 |
Symbol | |
ID | 5410741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1962853 |
End bp | 1964016 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869137 |
Product | nucleotidyl transferase |
Protein accession | YP_001405057 |
Protein GI | 154151439 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.399282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGGG GCGAAGGTAC ACGCCTGCGC CCTCTCACCT TCGAACGGCC AAAACCCTGT ATTCCGATCG TCAACCGACC GTCAATCCAG CACCTGGTTT CCCATCTCTC CAACCTTGGG TTCCGCGAAG TGGTGATGAC CCTTGGATAC ATGGGAAAAG ACATCGAGGC TGCGCTAGGT GATGGGTCAC TCTATGGCGT TGATATCACG TATGTCCATG AGAAAACCAA GCTCGGGACA GCCGGCAGCG TGCGCAATGC CAAAAAATAT CTTGACGATC AGGACTTCCT TGTGGTCGGC GGCGATCATG TTACCGATCT TAATGTCCTT GAATTCTACC GGACCCACCA GAAGGAGAAG GCCGTTACTA CAATCGGCCT GATCTCGATC GATGATCCCG GGGAGTATGG TATCGCTGAG ATCGATGTGA GTTATGAGAT AAAACGGTTC AAGGAGAAGC CTTCCCCCGG AGAGATCTTC TCCAATCTCG CAAGCACCGG GATGTACGTC TGCAGTCCTG AGATCTTCGA TTATATTCCG TCCGGGAAAA AATCCGACTT TGCCCGGGAC ATTTTCCCGC GCCTGATGGA GGAAGGAAAA TCCCTCAAGG GCTGGCTTGC CCGCGGGAAC TGGACCGATG TGGGCAGCCC GCACATGCTC CGCCAGGCCG AGCGCTGGAA ACTCCAGGAG ATCACCACCA CCGATATCAT CGGCGATCTT TCCATGCACG GAGCCCGGAT CCAGGGACCG GTGAATCTTG GGGATTCGAT AACCCTTGGG AAGAACACCC GGGTGATCGG GCCGGTATCG ATTGGATCGG GCACCACCAT CGGAAACAAC GTGCTGATCG GTCCCTATAC GAGTATCGGC GAGCGCTGCA TTATCCGGAA CAACGCGAAG ATCTTCTCGT CTTCGCTCTA CAACCGGGTA ACAATCGGAT CAAACAGCAC GATCTCAGGA AGCATCATTG ATAACGACAC CCATATAGGT GAGGGCTGCA GTATTGAGAA CGATACCGTT CTTGGCCCCC GGGTGGTGCT GCGCAACAAC GTGGTGGTCC ATTCCAAGAC CCGAATCTGG CCTGAGATCG TGGTCTGCGA TAATCAGATC ATAAAAGAGC ACGTGCTCAA CGACAAGTTC GACCTCCGGT GCGAGGGATC GTAA
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Protein sequence | MCGGEGTRLR PLTFERPKPC IPIVNRPSIQ HLVSHLSNLG FREVVMTLGY MGKDIEAALG DGSLYGVDIT YVHEKTKLGT AGSVRNAKKY LDDQDFLVVG GDHVTDLNVL EFYRTHQKEK AVTTIGLISI DDPGEYGIAE IDVSYEIKRF KEKPSPGEIF SNLASTGMYV CSPEIFDYIP SGKKSDFARD IFPRLMEEGK SLKGWLARGN WTDVGSPHML RQAERWKLQE ITTTDIIGDL SMHGARIQGP VNLGDSITLG KNTRVIGPVS IGSGTTIGNN VLIGPYTSIG ERCIIRNNAK IFSSSLYNRV TIGSNSTISG SIIDNDTHIG EGCSIENDTV LGPRVVLRNN VVVHSKTRIW PEIVVCDNQI IKEHVLNDKF DLRCEGS
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