Gene Mboo_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1855 
Symbol 
ID5410448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1932819 
End bp1933379 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content56% 
IMG OID640869093 
Productflavin reductase domain-containing protein 
Protein accessionYP_001405013 
Protein GI154151395 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.165677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.56563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG TAACGCTCGG CCCGATGCCG TACCTGAGTG TCATGCCCAC GGTCCTTGTG 
GGTGCAAACG TGAAAGGCAA AGCAAACTAC ATGACTGTTG CCTGGGCAAC GGTCGCCTGC
ATGGCCCCCC CGATGCTCTG CGTGGCAATC AACAAGCAGC GGTACACTGC GATCGGGATC
GAGGAGAACA AGACGTTTTC CGTCAACATT CCCTCAGCAG CCCAGGTGAT CGAAACCGAC
CACTGCGGCC TTGTCTCCGG TACACACAAG GACAAGTCAA CGGTCTTTAC GTCATATTAC
GGAAAACTGA AGACCGCACC CCTGGCAAAG GAATGCCCGG TCAACATTGA ATGCAGGCTC
TACAACTCGG TGGACTGCGG GAGCCATCTC CTGTACGTGG GTGAAATCGC AGAGATCCAT
GCGGACAAGT CTGTCCTGAC CGACGGGAAG CCAGACGTTG CGAAGATTGC TCCGATCGTG
TACTCGCAGG CCACCTATTT CGGTGTGGGA AAGGAGCTCG ACAAAGCCTT TTCCGCAGGC
AAGAAGTACC ACTCCGCGTA A
 
Protein sequence
MEKVTLGPMP YLSVMPTVLV GANVKGKANY MTVAWATVAC MAPPMLCVAI NKQRYTAIGI 
EENKTFSVNI PSAAQVIETD HCGLVSGTHK DKSTVFTSYY GKLKTAPLAK ECPVNIECRL
YNSVDCGSHL LYVGEIAEIH ADKSVLTDGK PDVAKIAPIV YSQATYFGVG KELDKAFSAG
KKYHSA