Gene Mboo_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1802 
Symbol 
ID5411981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1880362 
End bp1881285 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content52% 
IMG OID640869037 
Productglycosyl transferase family protein 
Protein accessionYP_001404961 
Protein GI154151343 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.319238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.13058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA ACAAAGATGA GGTCTGCATC CTTATCCCCA CGCTGAATGA GAGCTTAACC 
ATCGGTCCGG TGATTAAGGA TTTTAAAAGC CTTGGCTTTA ACCGCATCCT TGTCATCGAT
GGTAAAAGCA CGGACAATAC CGTTAAGAAT GCGCGGGAGG CCGGGGCAGT AGTCCGTACC
CAGTCCGGCA AGGGCAAGGG CAACGCTATC ATTGAGGCAT TCGAGATCAT CGAAGAGCCC
TATATCCTGA TGGTTGATGG TGACGGGACG TACTCGGCCA AGGACGCGGA AAAGATGCTT
ACTCCGCTCT TTTTGGGATT CGATCAGGTG ATCGGAGACC GGCTTATCAA TGCAGAGGAA
GGGTCGTTCT CACATCTCAA CCTCTTTGGC AACCACATGC TTAATCTCTT TTTCAAGCTT
GCCCACAGCC GTGACCTCCA CGATATTCTT TCCGGCTACC GGGCCTTTAC CAAGCTCTCC
ATCCAGCAGA TGAACTTAAA GGAGACCGGC TTTGAGATTG AGACCGAGAT GTCTGTTGAG
GCGGTCAGAA ACGGCCAGCG GATCATGGTT GTACCGATCC GGTACTCCCG CCGCCCGGGA
ACGCCGACAA AACTCTCCCC GTTCCACGAT GGGATCCGGA TCGTGACCAC CATCTACCGG
CTTGCCCGGG TCAACAACCC GATGTTTTAT TTCGGCATTA TGGGGCTGTC TATTTCTGTC
CTGGGGCTGC TCACCGGGGT ATATGTGCTG CTGGAATGGT TTCGTAATAT CCAGCATATC
CCTCTCACCA TCCTCACGGT GCTCCTGATC GTAGTAGGGA TCGAGATCTT CATGTTCGGG
ATGATCTCTG ATATGCTGCT TGTCTTCCAC CGGGAGATTA TCCGGGAGAT CCAGCTGAAC
CAGCAACCCC GGCAGCCAAA GTGA
 
Protein sequence
MKFNKDEVCI LIPTLNESLT IGPVIKDFKS LGFNRILVID GKSTDNTVKN AREAGAVVRT 
QSGKGKGNAI IEAFEIIEEP YILMVDGDGT YSAKDAEKML TPLFLGFDQV IGDRLINAEE
GSFSHLNLFG NHMLNLFFKL AHSRDLHDIL SGYRAFTKLS IQQMNLKETG FEIETEMSVE
AVRNGQRIMV VPIRYSRRPG TPTKLSPFHD GIRIVTTIYR LARVNNPMFY FGIMGLSISV
LGLLTGVYVL LEWFRNIQHI PLTILTVLLI VVGIEIFMFG MISDMLLVFH REIIREIQLN
QQPRQPK