| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1768 |
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| Symbol | |
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| ID | 5410833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1850721 |
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| End bp | 1851779 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640869002 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001404927 |
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| Protein GI | 154151309 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000159776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTGC TGATAACCGG GGGTGCCGGG TTTGTCGGGT CAAATCTTGC GATTTTCCTG
AAAAACCGCC TGCCTGCCAC CACGGTTATC TGTTTTGATA ACCTGAAACG AAGAGGTTCC
GAACTGAATC TTACCCGGTT GAAAGTGGCC GGGATCCAAT TTACCCATGG GGATGTCCGG
AATGAGGAAG ATTTCGAGGC GCTTCCTCCT TTTGACCTGA TGATCGAATG CTCAGCTGAA
CCTTCGGTTC TTGCGGGGGT CGGATCGTCA CCATCGTATG TCATGAACAC GAACCTGCTG
GGCACGATTA ACTGCCTTGA AGCAGTCAGG AAAAACCATG CGGCCATCCT CTTTCTCTCC
ACGAGCCGGG TGTATCCCAT CCGACCGATC AATGCTCTTC CGTTCCGCGA GGAGGCCACC
CGGTTCTCGC TGGGAGATAC CACGGGAATT CCCGGGGTGA GCTCTCGGGG GATTGCCGAA
GAGTTCCCCC TCGCCGGCCC CCGGTCGATC TATGGGGCGA CCAAGTTATG CTCTGAGTAT
CTCATCCAGG AGTACTGCGC ATCATATGGT ATCCATGCAA TCATCAACCG GTGCGGGCTT
ATCGCCGGGC CGTGGCAGAT GGGCAAAGTC GATCAGGGTG TGGTGATGCT CTGGGCGGCA
TGTCACCGGT TCAGAAAAGA TCTAGCCTAT ATCGGGTACT ACGGTACAGG AAAACAGGTC
CGGGATGTGC TGCATATCGA TGATCTCTGT GATCTGGTCC TTGCGCAGAT GAAACGTCTT
GATGAATTTT CCGGGGAGAT ATTCAACGCT GGCGGCGGAC TGAACAACAG CATCTCGCTC
CAGGAGATGA CCGCGATATG CCGGGAAGTT ACCGGAGAAA CAATTCCTGT ACGTTCTGTT
CCGGAGACCC GGCCAAACGA CCTCATCTGG TATGTTACCG ATAATTCCCG AGTCTCCCGC
ACCTTTGGCT GGAAACCACA ACGATCGGTT AAGGATACCG TCACGGATAT TACGCGGTGG
ATTGATTCCA GCAGGGCATT ACTCTCCAAT ATTTTATAG
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| Protein sequence | MRVLITGGAG FVGSNLAIFL KNRLPATTVI CFDNLKRRGS ELNLTRLKVA GIQFTHGDVR
NEEDFEALPP FDLMIECSAE PSVLAGVGSS PSYVMNTNLL GTINCLEAVR KNHAAILFLS
TSRVYPIRPI NALPFREEAT RFSLGDTTGI PGVSSRGIAE EFPLAGPRSI YGATKLCSEY
LIQEYCASYG IHAIINRCGL IAGPWQMGKV DQGVVMLWAA CHRFRKDLAY IGYYGTGKQV
RDVLHIDDLC DLVLAQMKRL DEFSGEIFNA GGGLNNSISL QEMTAICREV TGETIPVRSV
PETRPNDLIW YVTDNSRVSR TFGWKPQRSV KDTVTDITRW IDSSRALLSN IL
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