| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1751 |
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| Symbol | |
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| ID | 5409912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1831176 |
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| End bp | 1831751 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640868986 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001404911 |
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| Protein GI | 154151293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.551813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGGAAAT TTGAGAGAGT TAAAACAAAA CTCAACGACA TAACAATAAT CCGGCCCACC
GTCTTCAAAG ATGATCGCGG TTTTTTCCTT GAGACCTATA ACCGGGAAGA ATTTGCAGAA
GTGGGTATCA CTGATGAATT TGTTCAGGAT AATGTATCGC ACTCGGCAAA AGGAGTTGTA
CGGGGTCTCC ATTACCAGTC AAAAAATGCG CAGGGTAAAC TGGTACGGGT GTTGAGGGGA
AAAATCTTCG ATGTTGTGGT CGATATCCGC AATGGCTCTC CAACCTATGG GCATCATCTC
GGTATCGAGC TTGATGCACA GGATGCCGGG ATGTTATTTG TCCCGGTTGG TTTTGCCCAT
GGATTCATGG CCTTAAAAGA CGCTACCGAA GTCATGTACA AGGTGACAGA TTTTTATTCC
CCGCAGTATG ATGCAGGTAT TCGCTGGGAT GATCCCGATC TCCGGATTCC CTGGCCGATG
AAGGCACAGG AAATCAGCAG GCCGGTTGTC TCTCCAAAAG ATGCAGTGCT TCCTTTCCTC
AGGGACATTA TATCACCGTT TAACTATGCC GGGTAA
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| Protein sequence | MGKFERVKTK LNDITIIRPT VFKDDRGFFL ETYNREEFAE VGITDEFVQD NVSHSAKGVV
RGLHYQSKNA QGKLVRVLRG KIFDVVVDIR NGSPTYGHHL GIELDAQDAG MLFVPVGFAH
GFMALKDATE VMYKVTDFYS PQYDAGIRWD DPDLRIPWPM KAQEISRPVV SPKDAVLPFL
RDIISPFNYA G
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