Gene Mboo_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1748 
Symbol 
ID5409909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1828009 
End bp1828911 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content45% 
IMG OID640868983 
Productglycosyl transferase family protein 
Protein accessionYP_001404908 
Protein GI154151290 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCC CTCTTGTCTG TATTATCATC CTGAACTGGA ATGGCTGTCA GGATACTCTT 
GCCTGTCTGC GTTCTCTTAA AAATATCACC TATTCTGACT ATCGCATCAT TCTTATCGAT
AATAACTCCT CAGATAATTC CCTCAACGAA TTTGCCTTGC ATCTTGACCC CGGTATTACC
TTTTTCCCCC TCAGGGAGAA TCTCGGGTTT GCGAAGGGAT GCAACTTTGG CATGAAGTAC
GCACTGGACT CATTAAATCC GCAGTACATC CTGCTCCTGA ATAATGATAC CGAGGTAGAA
CCTGATTTCC TGGATAAAAT GGTTAAAGCA GCGCAAACAT CTGGAGCAGG TATGGTTCAG
GCGTTGATGC TCAAACAATG GGATCATACG ATTATCGATA GTACCGGCCA TATCCTTGTG
TGGGGGCAGG TAGAGGACCG GGGCAACAGG GAAATTAATT CCGGCCAATA TACTGACAAT
CGAAATCTTA TCGGAGTGTC CGGAGCAGCT GCATTATATC GGTCTGAGAT GATCCGGCAG
ATGGGGATGT TCGATGAATC ATTTGATTCC GGATTCGAGG ATAGCGAGTA TTCGTGGCGG
GCATACAAGA CTGGATGGAA AACGGCGTAT TCTCCCGCCG CCATCATTTA CCATAAAAGG
AGTATCTCGG TTATTAAAAG ATCTGACGTG GATCCACTTT TTTTTCAATC TACCTGGCGC
AATTATGTCC GTCCCTGTAA AATGCATGGG ACAAGTGTGC AGAAGATCCA GTTAACAATA
AACATTTTAT GCAGTATCGT GAAGAGCGGG GTTGGTAAAT GGATGGGAAG GAATAACGTG
GGCGCCCATC CCTATATCAT TGCCCTCAGG GAAATGCTGA AACGCGATAT TAGGCAGAAA
TAA
 
Protein sequence
MESPLVCIII LNWNGCQDTL ACLRSLKNIT YSDYRIILID NNSSDNSLNE FALHLDPGIT 
FFPLRENLGF AKGCNFGMKY ALDSLNPQYI LLLNNDTEVE PDFLDKMVKA AQTSGAGMVQ
ALMLKQWDHT IIDSTGHILV WGQVEDRGNR EINSGQYTDN RNLIGVSGAA ALYRSEMIRQ
MGMFDESFDS GFEDSEYSWR AYKTGWKTAY SPAAIIYHKR SISVIKRSDV DPLFFQSTWR
NYVRPCKMHG TSVQKIQLTI NILCSIVKSG VGKWMGRNNV GAHPYIIALR EMLKRDIRQK