Gene Mboo_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1746 
Symbol 
ID5409907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1825654 
End bp1826919 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content47% 
IMG OID640868981 
Productglycosyl transferase, group 1 
Protein accessionYP_001404906 
Protein GI154151288 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAA ATTTATTGAC TACAATACCA GATCGACTTT TTGCCGATCT CAAGGATAAA 
ACACTTCTTG TTATCACGCC GGATTTTCCT GATAGGGATC ACCACTATAT TGGTTCAATT
TTTGTGAAAA ACCAGATTGA ACCACTAAAA AAAATTTTCA GACAAATTAT TGTCATCTGC
CCGGTCCTGT TCAGTTTCCG GCTGCTGCCC AATGACCGGT ACTGCAAAAA TTACACATAC
GGGAATGTCC GGGTCTTTTA CCCGCGCTGT TTCTTTCTTC CCCGCAGCCT TCCGCTTCCG
TTTGTAAGCA ATAAACAAAA AATGTCATTT GATTTCCGGT ATTCTGCAGT GAGACAGATT
ATCCGGAAAG AAAACACGCA GTTTGATCTT ATCCATGCCC ATTTCACCTG GCCCTCCGCA
GCAATTGCCG CGCAGATCAG GGAAGAGTTC CATGTCCCAG TTGTTACAAC AATCCATGAG
GATTCAGGGT GGCTTGAGGA AGAGATCCGT ATGGAGCAGC CACTCCTCGT CAGGGCATGG
AGAGAATGCG ACAGGTTAAT CAGAGTAAAT AAGAAAGACG TCCCACTCCT CCTCCGCTAC
AATACCCGGA TTATCTCGAT TCCCAATGGC TTTGGGCCGG AATTTCATCC GATGGACAAG
CAGGAGTCAC GGCGCGTCCT TTGTATTCCG GCGGAGAATA AGATTGTTTT CAGTCTCGCT
CCCCTGATCG AGCGCAAGGG TTTTTCCTAT CTTATCGATG CCATGGAACA GGTGATAAAA
AAAGATCCTT CGACCCTCTG TTATATCGGG GGTGAAGGCC CGGAAAAGAA GAACCTTACA
GAAAAGATTC GGAAAAAGGG GCTGCAAAAA AATATTTTTC TTCTCGGGTT TGTCCCGGAC
AAACAGGTTG TCCGCTGGAT GAACAGTGCA GATCTCTTTG TCCTGCCAAG CCTCAAGGAA
GGAAATCCGA CCGTCATGTT TGAATGCCTC GGATGCGGGA CCCCGTTTAT CGGGACGGAT
GCCGGGGGGA TCCCGGAAAT AATTCAGTCG GACGATTACG GGTACGTATG TGAACCTGCA
AATCCGCAAG CCCTGGCACA GGTCCTTACC GCGGCCCTGG GAAGAGCATG GGACCGTGAA
CGGATCTCTC AATACGCACA ACAATTCAGC TGGGAAGCAA TCGGACGCGA ATTGAACGAG
GTGTACAGAC AGTTAATTGA ATCATTTCCC GCAGATCTTT ATGAATTTAA GGCAGATAAA
CCCTGA
 
Protein sequence
MDENLLTTIP DRLFADLKDK TLLVITPDFP DRDHHYIGSI FVKNQIEPLK KIFRQIIVIC 
PVLFSFRLLP NDRYCKNYTY GNVRVFYPRC FFLPRSLPLP FVSNKQKMSF DFRYSAVRQI
IRKENTQFDL IHAHFTWPSA AIAAQIREEF HVPVVTTIHE DSGWLEEEIR MEQPLLVRAW
RECDRLIRVN KKDVPLLLRY NTRIISIPNG FGPEFHPMDK QESRRVLCIP AENKIVFSLA
PLIERKGFSY LIDAMEQVIK KDPSTLCYIG GEGPEKKNLT EKIRKKGLQK NIFLLGFVPD
KQVVRWMNSA DLFVLPSLKE GNPTVMFECL GCGTPFIGTD AGGIPEIIQS DDYGYVCEPA
NPQALAQVLT AALGRAWDRE RISQYAQQFS WEAIGRELNE VYRQLIESFP ADLYEFKADK
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