Gene Mboo_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1663 
Symbol 
ID5410572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1738139 
End bp1738870 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content55% 
IMG OID640868897 
Productmethyltransferase type 11 
Protein accessionYP_001404823 
Protein GI154151205 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.639645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0934074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTG CAAAACGGGA GAAGATCCAG CAGCATTACG ATGAAATTGC TGAGGTATAC 
GATCTCCACT ACGACCACCC CCGCGGCAGG ACGTACCATA CCCGCATCAG CCGTCATGTA
ATGGAGGCAC TCCCCCGGGG TGGGGCTCTC CTTGATATTG GTTGTGGTAC CGGCCTTTTT
GTGGAAAAAT ACCTCCACCA TGGCGGTTCC GCTGTAGGCA TTGATCTCAG CAGGAACATG
ATCGAGCGGG CACGCAGGCG ATGCAGCTGT TGCGGTTTCA CCCTTGGGAC CGGCGAATCT
CTTCCGTTCC GCGATAACTC GTTTGATGCT GTTGCGAGCC TTCTTGTTTT CAGCTATGTG
CGGGATCCTG AATCCATGCT CAACGAGGCG TACCGGGTGA TGCGCCCCGG TGGGGCGATC
TCGATCTGTA CGCTGGGGAA AAAACTGCTC ACGAGCGGCA TTCCGGTTCT CTACAAGGTA
AGCGAGAAGA TCCGGATCCC CCATGTGGTC ATGAAGGATT TCGGCGAACA TTACTATGAC
GAAGAGGATA TGAGGGCACT CTTTTCCCGT GCCGGCTTCT GCAATGTAAA GGTCAGCTGG
TGCTCGTTTG CCCATATCGA CATGGGTGAC CCTCTTTTCA ATCTTGCACA GCGGATGGAG
CCGTTTATCG AGCGCAGGAT CCCCCAGCTG ACGTACAATA TCTGCGTGGA TGCACAGAAA
CCGGCAGAGT GA
 
Protein sequence
MTVAKREKIQ QHYDEIAEVY DLHYDHPRGR TYHTRISRHV MEALPRGGAL LDIGCGTGLF 
VEKYLHHGGS AVGIDLSRNM IERARRRCSC CGFTLGTGES LPFRDNSFDA VASLLVFSYV
RDPESMLNEA YRVMRPGGAI SICTLGKKLL TSGIPVLYKV SEKIRIPHVV MKDFGEHYYD
EEDMRALFSR AGFCNVKVSW CSFAHIDMGD PLFNLAQRME PFIERRIPQL TYNICVDAQK
PAE