| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1643 |
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| Symbol | |
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| ID | 5411188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1720916 |
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| End bp | 1721338 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640868877 |
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| Product | CopG family transcriptional regulator |
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| Protein accession | YP_001404803 |
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| Protein GI | 154151185 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000269216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACACTCG AAAACGATCT CTCCCGCATC GGGATCTCCC TTCCCAAGAA CCTGCTTGAC
CGGTTTGACG AAATTATCAA TGCCCGGGGA TACTCCTCCC GGTCTGAGGG TATTCGCGAC
GCGATCCGTA CCTACATCAC TTATTACAAG TGGATGGCGG ATGTCAAAGG CGAGCGTGAA
GGAGTGATCA CGATGGTCTA CGATCATGAC CAGCGCGGTC TTCTTACCAC AATTACGGAT
ATCCAGCACG AATTCCACGA GATTATCAAG GCATCCCTTC ATTCGCATGT GACCCATAAC
CGGTGCCTGG AAGTAATTCT TGTCCATGGC GATGGAGGAC AGCTCAAGGC GCTTGCCGAA
CGACTGATGT CCCAGAAAGG TGTTGAGTCC GTGAAACTGA CAACTATTCA GATTGAAGAA
TAA
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| Protein sequence | MTLENDLSRI GISLPKNLLD RFDEIINARG YSSRSEGIRD AIRTYITYYK WMADVKGERE
GVITMVYDHD QRGLLTTITD IQHEFHEIIK ASLHSHVTHN RCLEVILVHG DGGQLKALAE
RLMSQKGVES VKLTTIQIEE
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