Gene Mboo_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1642 
Symbol 
ID5411187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1720213 
End bp1720662 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID640868876 
Producthypothetical protein 
Protein accessionYP_001404802 
Protein GI154151184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000258996 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGTGTCG CAACCGATAT CATGCAGACG TTTGCCACAA AAGAGATCCG GTCCTGTTTC 
CGGGAGAGCG ATGGCTGGGA ATGCCGGCAG GAGTCCTCTC CTGTTCCCGG CGCCATGACC
TTTGTCCTGT CCCGTGAGAT CCGGGGGAAA AAACAGATCA TTCCCCTTGC GGTTTCGTAC
GAGCACGAAC CCACCCTCTT CCCGCTTGAG CATCTGGTTG GTACGATGAA AGGAAAGAGA
CTGACCGGAA AGTGCCTGCT TGTCCCAAAG GGGGCAGATG TCACCGCGCT TCCGGGAGAT
ATCCGGGTGC TTTTCATGGA TTCATTTGGA TTCGTGGATG AGAGACTGGT CTGGCTCACC
AAGAAGAAGA ATGCAAAACA GTACCTCGCT GCTGAAGTTC CTGCCGCTGC GGAACCTGCA
ACCCCGGCCA GCCAGCCGCA CGCAGCATAA
 
Protein sequence
MGVATDIMQT FATKEIRSCF RESDGWECRQ ESSPVPGAMT FVLSREIRGK KQIIPLAVSY 
EHEPTLFPLE HLVGTMKGKR LTGKCLLVPK GADVTALPGD IRVLFMDSFG FVDERLVWLT
KKKNAKQYLA AEVPAAAEPA TPASQPHAA